RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 OFD1O75665 1012 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 ARHGEF15O94989 841 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 POMCP01189 267 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 CA3P07451 260 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 CXCL8P10145 99 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 PTMSP20962 102 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 GRM5P41594 1212 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 BTG3Q14201 252 aaPredicted RBP19.33■□□□□ 0.68
SBDS-202ENST00000414306 GUF1Q8N442 669 aaKnown RBP19.33■□□□□ 0.68
SBDS-202ENST00000414306 RAD9AQ99638 391 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 FAM213AQ9BRX8 229 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 NKX2-4Q9H2Z4 354 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
SBDS-202ENST00000414306 INSL6Q9Y581 213 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 STYXL1Q9Y6J8 313 aa19.33■□□□□ 0.68
SBDS-202ENST00000414306 PDCD11Q14690 1871 aaKnown RBP19.32■□□□□ 0.68
SBDS-202ENST00000414306 ARL5CA6NH57 179 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 FAM189A1O60320 539 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 KIF20AO95235 890 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 HTRA4P83105 476 aaPredicted RBP19.32■□□□□ 0.68
SBDS-202ENST00000414306 KLHL40Q2TBA0 621 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 GLRA4Q5JXX5 417 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 SPRED2Q7Z698 418 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 ZNF689Q96CS4 500 aaPredicted RBP19.32■□□□□ 0.68
SBDS-202ENST00000414306 FAM212AQ96EL1 285 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 ACAP3Q96P50 834 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 CASD1Q96PB1 797 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 SEMA6BQ9H3T3 888 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 RC3H2Q9HBD1 1191 aaKnown RBP19.32■□□□□ 0.68
SBDS-202ENST00000414306 TYW1Q9NV66 732 aaKnown RBP19.32■□□□□ 0.68
SBDS-202ENST00000414306 HSPBP1Q9NZL4 362 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 CTNND2Q9UQB3 1225 aa19.32■□□□□ 0.68
SBDS-202ENST00000414306 TRIM49BA6NDI0 452 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 SOX1O00570 391 aaPredicted RBP19.31■□□□□ 0.68
SBDS-202ENST00000414306 MEFVO15553 781 aaPredicted RBP19.31■□□□□ 0.68
SBDS-202ENST00000414306 HOXA2O43364 376 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 GARTP22102 1010 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 SCNN1GP51170 649 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 YARSP54577 528 aaKnown RBP19.31■□□□□ 0.68
SBDS-202ENST00000414306 SPAG1Q07617 926 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 ADSSL1Q8N142 457 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 RPS6KC1Q96S38 1066 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 TMEM117Q9H0C3 514 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 MIOSQ9NXC5 875 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 MSRAQ9UJ68 235 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 PCDHA11Q9Y5I1 949 aa19.31■□□□□ 0.68
SBDS-202ENST00000414306 DNAJB2P25686 324 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 STIM1Q13586 685 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 LRIT3Q3SXY7 679 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 NOMO2Q5JPE7 1267 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 SPOUT1Q5T280 376 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 TRIML1Q8N9V2 468 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 RDH13Q8NBN7 331 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 URGCPQ8TCY9 931 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 SYAP1Q96A49 352 aaPredicted RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 EEF2KMTQ96G04 330 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 MTUS1Q9ULD2 1270 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 PLAGL2Q9UPG8 496 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 MRPL42Q9Y6G3 142 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 PPP1R3GB7ZBB8 358 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 NR3C1P04150 777 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 CLTAP09496 248 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 PMS1P54277 932 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 STX17P56962 302 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 RNASELQ05823 741 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 RAB30Q15771 203 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 ENOX2Q16206 610 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 DPCR1Q3MIW9 517 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 CRELD2Q6UXH1 353 aaPredicted RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 LRRC55Q6ZSA7 311 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 CMTR2Q8IYT2 770 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 FIBCD1Q8N539 461 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 LRCH3Q96II8 777 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 RPF1Q9H9Y2 349 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 UBN1Q9NPG3 1134 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 TBC1D13Q9NVG8 400 aa19.3■□□□□ 0.68
SBDS-202ENST00000414306 CPSF3Q9UKF6 684 aaKnown RBP19.3■□□□□ 0.68
SBDS-202ENST00000414306 CDH23Q9H251 3354 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 PDXKO00764 312 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 PSMA7O14818 248 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 CALUO43852 315 aaPredicted RBP19.29■□□□□ 0.68
SBDS-202ENST00000414306 PBX3P40426 434 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 SMAD3P84022 425 aaKnown RBP19.29■□□□□ 0.68
SBDS-202ENST00000414306 SLC10A6Q3KNW5 377 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 RBM43Q6ZSC3 357 aaKnown RBP19.29■□□□□ 0.68
SBDS-202ENST00000414306 CBWD2Q8IUF1 395 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 LRRC43Q8N309 656 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 GPD1LQ8N335 351 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 GSTCDQ8NEC7 633 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 NELFBQ8WX92 580 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 P2RX5Q93086 422 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 TIFAQ96CG3 184 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 SNX27Q96L92 541 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 CERS4Q9HA82 394 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 TOPORSQ9NS56 1045 aaPredicted RBP19.29■□□□□ 0.68
SBDS-202ENST00000414306 CACNG4Q9UBN1 327 aa19.29■□□□□ 0.68
SBDS-202ENST00000414306 LINC01553A4QN01 128 aa19.28■□□□□ 0.68
SBDS-202ENST00000414306 PTGESO14684 152 aa19.28■□□□□ 0.68
SBDS-202ENST00000414306 EXTL3O43909 919 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms