RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 RAD54LQ92698 747 aa18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 CASP10Q92851 521 aa18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 ERCC4Q92889 916 aaPredicted RBP18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 IGSF21Q96ID5 467 aa18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 TRIM6Q9C030 488 aaPredicted RBP18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 NRDE2Q9H7Z3 1164 aa18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 DBR1Q9UK59 544 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 HCN4Q9Y3Q4 1203 aa18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 USP15Q9Y4E8 981 aaPredicted RBP18.59■□□□□ 0.57
SCAMP4-204ENST00000414057 C2orf71A6NGG8 1288 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 HIDE1A8MVS5 230 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 PRR33A8MZF0 331 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 TSPAN1O60635 241 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 CXCL14O95715 111 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 ALDH2P05091 517 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 GALTP07902 379 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 PRR29P0C7W0 189 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 ITGA4P13612 1032 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 CAPSQ13938 189 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 MORC3Q14149 939 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 ANKRD54Q6NXT1 300 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 CNNM4Q6P4Q7 775 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 AGMOQ6ZNB7 445 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 DDX53Q86TM3 631 aaKnown RBP18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 VPS52Q8N1B4 723 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 MLKLQ8NB16 471 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 CCDC47Q96A33 483 aaKnown RBP18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 C7orf25Q9BPX7 421 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 TMEM175Q9BSA9 504 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 DNAJC25Q9H1X3 360 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 BLOC1S4Q9NUP1 217 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 MAN1B1Q9UKM7 699 aa18.58■□□□□ 0.57
SCAMP4-204ENST00000414057 MEIS3P2A8K0S8 358 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 USO1O60763 962 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 SPATA31C1P0DKV0 1188 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 KCNC3Q14003 757 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 KCNB1Q14721 858 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 UBXN11Q5T124 520 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 ASAP3Q8TDY4 903 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 PHF7Q9BWX1 381 aaPredicted RBP18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 GBP3Q9H0R5 595 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 POLR3FQ9H1D9 316 aaPredicted RBP18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 IRAK3Q9Y616 596 aa18.58■□□□□ 0.56
SCAMP4-204ENST00000414057 BDP1A6H8Y1 2624 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 CTSAP10619 480 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 GLRA2P23416 452 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 MBTD1Q05BQ5 628 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 LLGL2Q6P1M3 1020 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 ZBTB8OSQ8IWT0 167 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 RNF214Q8ND24 703 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 VN1R2Q8NFZ6 395 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 PLIN2Q99541 437 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 ZBP1Q9H171 429 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 KIAA1024Q9UPX6 916 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 ARIH1Q9Y4X5 557 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 IPPQ9Y573 584 aa18.57■□□□□ 0.56
SCAMP4-204ENST00000414057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 BIN1O00499 593 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 MED24O75448 989 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 RPN1P04843 607 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 DEKP35659 375 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 SLC11A1P49279 550 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 CUL4BQ13620 913 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 DPCR1Q3MIW9 517 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 CES5AQ6NT32 575 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 RNF135Q8IUD6 432 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 SMG8Q8ND04 991 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 SUSD6Q92537 303 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 PRIMPOLQ96LW4 560 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 TRIM9Q9C026 710 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 C2orf40Q9H1Z8 148 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 CBX8Q9HC52 389 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 C11orf16Q9NQ32 467 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 PRMT7Q9NVM4 692 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 DNM3Q9UQ16 869 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 FAN1Q9Y2M0 1017 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 HCFC2Q9Y5Z7 792 aa18.56■□□□□ 0.56
SCAMP4-204ENST00000414057 ARHGEF35A5YM69 484 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 FAM86C2PA6NEL3 165 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 LRRIQ4A6NIV6 560 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 ARF4P18085 180 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 RBM10P98175 930 aaKnown RBP18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 ITIH3Q06033 890 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 CBX2Q14781 532 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 HERC4Q5GLZ8 1057 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 C11orf57Q6ZUT1 292 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 MAEAQ7L5Y9 396 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 PPFIBP1Q86W92 1011 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 TMEM173Q86WV6 379 aaPredicted RBP18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 ZNF280BQ86YH2 543 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 LRRC15Q8TF66 581 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 CPB2Q96IY4 423 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 DNAJB4Q9UDY4 337 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 SSX2IPQ9Y2D8 614 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 GIT1Q9Y2X7 761 aa18.55■□□□□ 0.56
SCAMP4-204ENST00000414057 PVALEFA0A1B0GWK0 134 aa18.54■□□□□ 0.56
SCAMP4-204ENST00000414057 SMTNL1A8MU46 457 aa18.54■□□□□ 0.56
SCAMP4-204ENST00000414057 LOC730098B7Z3J9 87 aa18.54■□□□□ 0.56
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