RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CEP95Q96GE4 821 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 FAM89AQ96GI7 184 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 LOXL4Q96JB6 756 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 UHRF1Q96T88 793 aaPredicted RBP5□□□□□ -1.61
HMGB1P11-201ENST00000413899 KCNH6Q9H252 994 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 SLC12A5Q9H2X9 1139 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 MOCS1Q9NZB8 636 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 ZMYM3Q14202 1370 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 PJA2O43164 708 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 TEX33O43247 280 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 DTNBO60941 627 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 IPO13O94829 963 aaKnown RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 RPLP2P05387 115 aaKnown RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 GNAT2P19087 354 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 ACO1P21399 889 aaKnown RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 LPOP22079 712 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 PTPN7P35236 360 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 DSC2Q02487 901 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 HHEXQ03014 270 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 TARDBPQ13148 414 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 MTM1Q13496 603 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 IL10RAQ13651 578 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 LRRC41Q15345 812 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 ELAVL1Q15717 326 aaKnown RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 OTUD7BQ6GQQ9 843 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 HTR3DQ70Z44 454 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 FAM83AQ86UY5 434 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 RHOT1Q8IXI2 618 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 NSUN6Q8TEA1 469 aaKnown RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 ST8SIA2Q92186 375 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 MIEF2Q96C03 454 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 MRGPRX4Q96LA9 322 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 GTPBP4Q9BZE4 634 aaKnown RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 SENP6Q9GZR1 1112 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 TDP1Q9NUW8 608 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 TMEM140Q9NV12 185 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 AJAP1Q9UKB5 411 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 PCDHB1Q9Y5F3 818 aa4.99□□□□□ -1.61
HMGB1P11-201ENST00000413899 WNT10BO00744 389 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 CYP27B1O15528 508 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 MFAP3LO75121 409 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 GPR32O75388 356 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 MAGEA10P43363 369 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 FXR1P51114 621 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 PTH1RQ03431 593 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 RAB39AQ14964 217 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 BMT2Q1RMZ1 405 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 DCAF17Q5H9S7 520 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 SPTY2D1Q68D10 685 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 DRICH1Q6PGQ1 229 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 EPM2AIP1Q7L775 607 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 TTC7BQ86TV6 843 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 ZNF808Q8N4W9 903 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 ZGPATQ8N5A5 531 aaKnown RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 OR52N2Q8NGI0 321 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 IFI44Q8TCB0 444 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 HPS3Q969F9 1004 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 LSM14BQ9BX40 385 aaKnown RBP4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 C1QTNF3Q9BXJ4 246 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 SMPD4Q9NXE4 827 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 FAM30AQ9NZY2 134 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 CALCOCO1Q9P1Z2 691 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 ST6GALNAC2Q9UJ37 374 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 CLCA2Q9UQC9 943 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 PCDHA13Q9Y5I0 950 aa4.98□□□□□ -1.61
HMGB1P11-201ENST00000413899 MYBBP1AQ9BQG0 1328 aaKnown RBP4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 BTBD11A6QL63 1104 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 TBKBP1A7MCY6 615 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 CXorf49A8MYA2 514 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 SLC16A6O15403 523 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 OFD1O75665 1012 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 PARNO95453 639 aaKnown RBP4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 HSPA6P17066 643 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 DDCP20711 480 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 PCSK1P29120 753 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 RABGGTBP53611 331 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 CTXN1P60606 82 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 R3HDM1Q15032 1099 aaKnown RBP4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 AFMIDQ63HM1 303 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 B3GNT9Q6UX72 402 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 SEM1Q6ZVN7 128 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 TPH2Q8IWU9 490 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 ELOA2Q8IYF1 753 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 MAGEB6Q8N7X4 407 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 CHST13Q8NET6 341 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 CCHCR1Q8TD31 782 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 KAT5Q92993 513 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 MVB12AQ96EY5 273 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 DMRTA2Q96SC8 542 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 MAP3K14Q99558 947 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 EPC1Q9H2F5 836 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 DEF6Q9H4E7 631 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 LDAHQ9H6V9 325 aa4.97□□□□□ -1.61
HMGB1P11-201ENST00000413899 NMRK2Q9NPI5 230 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms