RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 EIF4BP23588 611 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 PON1P27169 355 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 TNFSF9P41273 254 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 GCLMP48507 274 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CLCN6P51797 869 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CRYBB1P53674 252 aaPredicted RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 CLDN10P78369 228 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 MRPS6P82932 125 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 ZBED6P86452 979 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 APBA1Q02410 837 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 MGAT3Q09327 533 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 SNX17Q15036 470 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 MTFR1Q15390 333 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 PTGISQ16647 500 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 EXOC3L4Q17RC7 722 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 EPC2Q52LR7 807 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 SEZ6Q53EL9 994 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 DPY19L2P1Q6NXN4 242 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 TRIM65Q6PJ69 517 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 GBP6Q6ZN66 633 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CTU1Q7Z7A3 348 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 RPAINQ86UA6 219 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 RSPH3Q86UC2 560 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CDR2LQ86X02 465 aaPredicted RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 BRSK2Q8IWQ3 736 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 ARRDC4Q8NCT1 418 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 NEK11Q8NG66 645 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CPLX3Q8WVH0 158 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CCDC127Q96BQ5 260 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CCDC51Q96ER9 411 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CPB2Q96IY4 423 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 DNAJC7Q99615 494 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CGRRF1Q99675 332 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 TCHPQ9BT92 498 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 SENP6Q9GZR1 1112 aaPredicted RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 TMEM117Q9H0C3 514 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 INTS2Q9H0H0 1204 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 TMX1Q9H3N1 280 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CDHR5Q9HBB8 845 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 TMEM8AQ9HCN3 771 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 SIX2Q9NPC8 291 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 PLCB1Q9NQ66 1216 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 STARD7Q9NQZ5 370 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 TOPORSQ9NS56 1045 aaPredicted RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 AGPAT5Q9NUQ2 364 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CEP72Q9P209 647 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 CPSF3Q9UKF6 684 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 PYCARDQ9ULZ3 195 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 TRPV2Q9Y5S1 764 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 TRIP12Q14669 1992 aaPredicted RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 PTPRJQ12913 1337 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 A0A1B0GUA9 196 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 LRRC53A6NM62 1247 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 ESPNB1AK53 854 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 NRDCO43847 1150 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 CTSHP09668 335 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 SKILP12757 684 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 ACTN1P12814 892 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 SLC9A1P19634 815 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 HOXA11P31270 313 aaPredicted RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 GTF2H1P32780 548 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 KRT9P35527 623 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 CETN1Q12798 172 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 PTK7Q13308 1070 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 ENOX2Q16206 610 aaKnown RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 MEA1Q16626 185 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 DCAF4L1Q3SXM0 396 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 KRT39Q6A163 491 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 NOTUMQ6P988 496 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 C15orf39Q6ZRI6 1047 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 CATSPER4Q7RTX7 472 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 CEP120Q8N960 986 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 SLC43A3Q8NBI5 491 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 LMO3Q8TAP4 145 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 BAP1Q92560 729 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 DHX38Q92620 1227 aaKnown RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 DEFB118Q96PH6 123 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 FNBP1Q96RU3 617 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 POP1Q99575 1024 aaKnown RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 BAG1Q99933 345 aaPredicted RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 NAA15Q9BXJ9 866 aaKnown RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 CELF4Q9BZC1 486 aaKnown RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 EDEM3Q9BZQ6 932 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 PDE11AQ9HCR9 933 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 TRMT13Q9NUP7 481 aaKnown RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 FBXL5Q9UKA1 691 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 OGDHLQ9ULD0 1010 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 LUC7L2Q9Y383 392 aaKnown RBP7.21□□□□□ -1.26
VPS41-204ENST00000413141 FHOD1Q9Y613 1164 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 CDY2AQ9Y6F7 541 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 ANK1P16157 1881 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 BRCA2P51587 3418 aa7.21□□□□□ -1.26
VPS41-204ENST00000413141 MEFVO15553 781 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 ARHGAP6O43182 974 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 B4GALT4O60513 344 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 CAND2O75155 1236 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 NPTXRO95502 500 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 MYCP01106 439 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 CLTAP09496 248 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 STAG3L1P0CL83 205 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms