RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 TMC2Q8TDI7 906 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 SCLYQ96I15 445 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 ACAP3Q96P50 834 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 IL23AQ9NPF7 189 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 FANCLQ9NW38 375 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 CPSF3Q9UKF6 684 aaKnown RBP20.31■□□□□ 0.84
CDC42-204ENST00000411827 PCDHB2Q9Y5E7 798 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 FAM189A1O60320 539 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 NPTXRO95502 500 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 ZNF18P17022 549 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 AP3M2P53677 418 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 FPGSQ05932 587 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 CCDC40Q4G0X9 1142 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 UBXN11Q5T124 520 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 LUZP1Q86V48 1076 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 NT5DC4Q86YG4 428 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 MFSD14AQ96MC6 490 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 FAM213AQ9BRX8 229 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 PCIF1Q9H4Z3 704 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 ASB7Q9H672 318 aa20.3■□□□□ 0.84
CDC42-204ENST00000411827 RPF1Q9H9Y2 349 aaKnown RBP20.3■□□□□ 0.84
CDC42-204ENST00000411827 LRRC10BA6NIK2 292 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 TISP43B9A030 160 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 HOXA2O43364 376 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 AKAP3O75969 853 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 STAG3L1P0CL83 205 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 TCP11X2Q5H9J9 407 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 PSRC1Q6PGN9 363 aaPredicted RBP20.29■□□□□ 0.84
CDC42-204ENST00000411827 BRSK2Q8IWQ3 736 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 THNSL1Q8IYQ7 743 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 IKZF4Q9H2S9 585 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 GIT1Q9Y2X7 761 aa20.29■□□□□ 0.84
CDC42-204ENST00000411827 DNAH12Q6ZR08 3092 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 KCNJ18B7U540 433 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 C9IYK1 514 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 ENPP3O14638 875 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 ADRB2P07550 413 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 CSF2RAP15509 400 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 GTF2H1P32780 548 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 KCNJ12Q14500 433 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 PSMD6Q15008 389 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 SAAL1Q96ER3 474 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 CNOT6LQ96LI5 555 aaKnown RBP20.28■□□□□ 0.84
CDC42-204ENST00000411827 FNBP1Q96RU3 617 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 HAPLN2Q9GZV7 340 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 MTIF3Q9H2K0 278 aaKnown RBP20.28■□□□□ 0.84
CDC42-204ENST00000411827 TMEM161AQ9NX61 479 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 RBAKQ9NYW8 714 aaPredicted RBP20.28■□□□□ 0.84
CDC42-204ENST00000411827 USP20Q9Y2K6 914 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 DERAQ9Y315 318 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 IPPQ9Y573 584 aa20.28■□□□□ 0.84
CDC42-204ENST00000411827 HARSP12081 509 aaKnown RBP20.27■□□□□ 0.84
CDC42-204ENST00000411827 ITGA4P13612 1032 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 ITGB8P26012 769 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 ACOT2P49753 483 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 CYP24A1Q07973 514 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 BFSP1Q12934 665 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 CRELD2Q6UXH1 353 aaPredicted RBP20.27■□□□□ 0.84
CDC42-204ENST00000411827 DEFB128Q7Z7B8 93 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 GAS2L3Q86XJ1 694 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 ECHDC2Q86YB7 292 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 IRF2BP1Q8IU81 584 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 TRIM59Q8IWR1 403 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 RNF214Q8ND24 703 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 BORCS6Q96GS4 357 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 EIF2AQ9BY44 585 aaKnown RBP20.27■□□□□ 0.84
CDC42-204ENST00000411827 OSBPL7Q9BZF2 842 aa20.27■□□□□ 0.84
CDC42-204ENST00000411827 SAMSN1Q9NSI8 373 aaKnown RBP20.27■□□□□ 0.84
CDC42-204ENST00000411827 LIMA1Q9UHB6 759 aaKnown RBP20.27■□□□□ 0.84
CDC42-204ENST00000411827 XPOTO43592 962 aaKnown RBP20.26■□□□□ 0.83
CDC42-204ENST00000411827 MGEA5O60502 916 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 TPM3P06753 285 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 MTIF2P46199 727 aaKnown RBP20.26■□□□□ 0.83
CDC42-204ENST00000411827 CASP4P49662 377 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 VAMP7P51809 220 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 CLDN10P78369 228 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 FILIP1LQ4L180 1135 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 CDR2LQ86X02 465 aaPredicted RBP20.26■□□□□ 0.83
CDC42-204ENST00000411827 PARD3BQ8TEW8 1205 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 BADQ92934 168 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 RBSNQ9H1K0 784 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 C2CD2Q9Y426 696 aa20.26■□□□□ 0.83
CDC42-204ENST00000411827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDC42-204ENST00000411827 TTC26A0AVF1 554 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 GOLGA8IPA6NC78 632 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 GOLGA6L3A6NEY3 463 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 GOLGA8JA6NMD2 632 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 N4BP1O75113 896 aaKnown RBP20.25■□□□□ 0.83
CDC42-204ENST00000411827 SLC34A2O95436 690 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 FGBP02675 491 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
CDC42-204ENST00000411827 ENOX2Q16206 610 aaKnown RBP20.25■□□□□ 0.83
CDC42-204ENST00000411827 MAN2A1Q16706 1144 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 ZNF598Q86UK7 904 aaKnown RBP20.25■□□□□ 0.83
CDC42-204ENST00000411827 RTN4RL1Q86UN2 441 aaPredicted RBP20.25■□□□□ 0.83
CDC42-204ENST00000411827 RDH13Q8NBN7 331 aa20.25■□□□□ 0.83
CDC42-204ENST00000411827 SMG8Q8ND04 991 aaKnown RBP20.25■□□□□ 0.83
CDC42-204ENST00000411827 CACTINQ8WUQ7 758 aaKnown RBP20.25■□□□□ 0.83
CDC42-204ENST00000411827 TUBGCP2Q9BSJ2 902 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms