RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 FAM193BQ96PV7 902 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 C7orf25Q9BPX7 421 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 PLVAPQ9BX97 442 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
NEDD1-202ENST00000411739 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
NEDD1-202ENST00000411739 FRMD3A2A2Y4 597 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 GOLGA6L4A6NEF3 574 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 CLDN3O15551 220 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 MEFVO15553 781 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-202ENST00000411739 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-202ENST00000411739 TOM1L1O75674 476 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 GAP43P17677 238 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 OR1G1P47890 313 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 ERVFC1P60507 584 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 MRPL38Q96DV4 380 aaKnown RBP13.11□□□□□ -0.31
NEDD1-202ENST00000411739 RPS6KC1Q96S38 1066 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 UBN1Q9NPG3 1134 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 A0A1W2PQ27 194 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 A0A1W2PQ64 194 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 H0YCG3 227 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 PTGESO14684 152 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 IGFBP6P24592 240 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-202ENST00000411739 GTF2F1P35269 517 aaKnown RBP eCLIP13.11□□□□□ -0.31
NEDD1-202ENST00000411739 TNFSF9P41273 254 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 SPAG1Q07617 926 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 SPG21Q9NZD8 308 aa13.11□□□□□ -0.31
NEDD1-202ENST00000411739 XIRP2A4UGR9 3374 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 RALGAPA2Q2PPJ7 1873 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 CASTOR2A6NHX0 329 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 NRP1O14786 923 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 ZNF202O95125 648 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 MCF2P10911 925 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
NEDD1-202ENST00000411739 ZPBP2Q6X784 338 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 RBM23Q86U06 439 aaKnown RBP13.1□□□□□ -0.31
NEDD1-202ENST00000411739 MAP4K3Q8IVH8 894 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 COLGALT2Q8IYK4 626 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 AUTS2Q8WXX7 1259 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 P2RX5Q93086 422 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 IGFLR1Q9H665 355 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 PPP1R37O75864 691 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 CA8P35219 290 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 GRM5P41594 1212 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 PTPROQ16827 1216 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 TCEAL5Q5H9L2 206 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 ADGRD2Q7Z7M1 963 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 ACAP3Q96P50 834 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 CCDC94Q9BW85 323 aaPredicted RBP13.1□□□□□ -0.31
NEDD1-202ENST00000411739 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 GOLGA2P5Q9HBQ8 144 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 SLC39A2Q9NP94 309 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 SEL1LQ9UBV2 794 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
NEDD1-202ENST00000411739 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 PER2O15055 1255 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 ALDH2P05091 517 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 POU3F3P20264 500 aaPredicted RBP13.09□□□□□ -0.31
NEDD1-202ENST00000411739 MCL1Q07820 350 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 PLPP4Q5VZY2 271 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 KRBA2Q6ZNG9 492 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 EP400NLQ6ZTU2 488 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 NOC3LQ8WTT2 800 aaKnown RBP13.09□□□□□ -0.31
NEDD1-202ENST00000411739 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
NEDD1-202ENST00000411739 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
NEDD1-202ENST00000411739 VN1R3Q9BXE9 311 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 OLFML3Q9NRN5 406 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 UNC80Q8N2C7 3258 aa13.09□□□□□ -0.31
NEDD1-202ENST00000411739 CXCL8P10145 99 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 ACOT2P49753 483 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 L1TD1Q5T7N2 865 aaKnown RBP13.08□□□□□ -0.31
NEDD1-202ENST00000411739 UNC13DQ70J99 1090 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 TMEM169Q96HH4 297 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 ACCSQ96QU6 501 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 MSTO1Q9BUK6 570 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 ST6GALNAC4Q9H4F1 302 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 MAGEF1Q9HAY2 307 aa13.08□□□□□ -0.31
NEDD1-202ENST00000411739 TRIP11Q15643 1979 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 SMIM28A0A1B0GU29 152 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 INPPL1O15357 1258 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 KLRC4O43908 158 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 THP07101 528 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 ADSSP30520 456 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 HOXD13P35453 343 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
NEDD1-202ENST00000411739 KRT17Q04695 432 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 DSC1Q08554 894 aa13.08□□□□□ -0.32
NEDD1-202ENST00000411739 SLC10A6Q3KNW5 377 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms