RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 MYH11P35749 1972 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 NR1I2O75469 434 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 PLS3P13797 630 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 MARCKSP29966 332 aaPredicted RBP19.46■□□□□ 0.71
LSM5-204ENST00000409909 KIAA0319Q5VV43 1072 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 KANK3Q6NY19 840 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 USP49Q70CQ1 688 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 TMEM87AQ8NBN3 555 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 TMEM161BQ8NDZ6 487 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 SPIRE2Q8WWL2 714 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 EPSTI1Q96J88 318 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 POP1Q99575 1024 aaKnown RBP19.46■□□□□ 0.71
LSM5-204ENST00000409909 TARS2Q9BW92 718 aaKnown RBP19.46■□□□□ 0.71
LSM5-204ENST00000409909 C1QTNF1Q9BXJ1 281 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 GPR62Q9BZJ7 368 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 C11orf16Q9NQ32 467 aa19.46■□□□□ 0.71
LSM5-204ENST00000409909 MRPL17Q9NRX2 175 aaKnown RBP19.46■□□□□ 0.71
LSM5-204ENST00000409909 TRIP11Q15643 1979 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 LOC730098B7Z3J9 87 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 C2CD2LO14523 706 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 ABLIM1O14639 778 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 PLCG1P19174 1290 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 TUSC3Q13454 348 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 DHX8Q14562 1220 aaKnown RBP19.45■□□□□ 0.7
LSM5-204ENST00000409909 SPECC1Q5M775 1068 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 C12orf76Q8N812 135 aaPredicted RBP19.45■□□□□ 0.7
LSM5-204ENST00000409909 CEP120Q8N960 986 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 FEZF2Q8TBJ5 459 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 B3GALT6Q96L58 329 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 PHF7Q9BWX1 381 aaPredicted RBP19.45■□□□□ 0.7
LSM5-204ENST00000409909 MRPL4Q9BYD3 311 aaKnown RBP19.45■□□□□ 0.7
LSM5-204ENST00000409909 CDT1Q9H211 546 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 CHST7Q9NS84 486 aa19.45■□□□□ 0.7
LSM5-204ENST00000409909 FBXO2Q9UK22 296 aaPredicted RBP19.45■□□□□ 0.7
LSM5-204ENST00000409909 CASTOR2A6NHX0 329 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 STX6O43752 255 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 THP07101 528 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 MAPTP10636 758 aaKnown RBP19.44■□□□□ 0.7
LSM5-204ENST00000409909 PROZP22891 400 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 GLUD2P49448 558 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 CLCN4P51793 760 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 CEBPZQ03701 1054 aaKnown RBP19.44■□□□□ 0.7
LSM5-204ENST00000409909 MCM6Q14566 821 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 HSP90AA2PQ14568 343 aaPredicted RBP19.44■□□□□ 0.7
LSM5-204ENST00000409909 CBX2Q14781 532 aaPredicted RBP19.44■□□□□ 0.7
LSM5-204ENST00000409909 TPRNQ4KMQ1 711 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 ZBTB33Q86T24 672 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 GPBP1Q86WP2 473 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 RNF135Q8IUD6 432 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 RAD54LQ92698 747 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 ZBTB45Q96K62 511 aaPredicted RBP19.44■□□□□ 0.7
LSM5-204ENST00000409909 REEP2Q9BRK0 252 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 EMILIN2Q9BXX0 1053 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 CCSER1Q9C0I3 900 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 ADAM7Q9H2U9 754 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 ADAM28Q9UKQ2 775 aa19.44■□□□□ 0.7
LSM5-204ENST00000409909 URODP06132 367 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 WEE2P0C1S8 567 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 KLRC2P26717 231 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 GRM5P41594 1212 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 DSG1Q02413 1049 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 ZNF568Q3ZCX4 644 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 FUT10Q6P4F1 479 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 PPFIBP1Q86W92 1011 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 RPGRIP1Q96KN7 1286 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 CLIC6Q96NY7 704 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 USP28Q96RU2 1077 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 RXFP1Q9HBX9 757 aa19.43■□□□□ 0.7
LSM5-204ENST00000409909 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
LSM5-204ENST00000409909 SRPRBQ9Y5M8 271 aaKnown RBP19.43■□□□□ 0.7
LSM5-204ENST00000409909 FAM86C2PA6NEL3 165 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 TEX28O15482 410 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 DCXO43602 365 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 TADA2AO75478 443 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 KIF4AO95239 1232 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 BRD1O95696 1058 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 ALADP13716 330 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 IGFBP6P24592 240 aaPredicted RBP19.42■□□□□ 0.7
LSM5-204ENST00000409909 SMTNP53814 917 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 OSTNP61366 133 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 ITIH3Q06033 890 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 GLRA4Q5JXX5 417 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 RARS2Q5T160 578 aaKnown RBP19.42■□□□□ 0.7
LSM5-204ENST00000409909 ALKAL1Q6UXT8 129 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 APBB1IPQ7Z5R6 666 aaPredicted RBP19.42■□□□□ 0.7
LSM5-204ENST00000409909 RASSF8Q8NHQ8 419 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 HASPINQ8TF76 798 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 FBXL18Q96ME1 805 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 PPP1R10Q96QC0 940 aaKnown RBP19.42■□□□□ 0.7
LSM5-204ENST00000409909 LRFN3Q9BTN0 628 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 DZANK1Q9NVP4 752 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 MUTYHQ9UIF7 546 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 KCNG1Q9UIX4 513 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 ODF2LQ9ULJ1 636 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 SSX2IPQ9Y2D8 614 aa19.42■□□□□ 0.7
LSM5-204ENST00000409909 SMIM28A0A1B0GU29 152 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 MEFVO15553 781 aaPredicted RBP19.41■□□□□ 0.7
LSM5-204ENST00000409909 GPR37L1O60883 481 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 MCF2P10911 925 aa19.41■□□□□ 0.7
LSM5-204ENST00000409909 DDIT3P35638 169 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms