RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 FEM1CQ96JP0 617 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 RPS6KC1Q96S38 1066 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 CAPS2Q9BXY5 557 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 UPF3AQ9H1J1 476 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 ALDH8A1Q9H2A2 487 aaPredicted RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 LIN28AQ9H9Z2 209 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 RXFP3Q9NSD7 469 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TMEM39AQ9NV64 488 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 MAGEC2Q9UBF1 373 aaPredicted RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 BAIAP2L1Q9UHR4 511 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 GOLGA6CA6NDK9 693 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 PEX11AO75192 247 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 LMNAP02545 664 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 GOLGA6DP0CG33 693 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 MYBP10242 640 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 GABRB3P28472 473 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 FAAP100Q0VG06 881 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 MYBPC3Q14896 1274 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 EXOC3L4Q17RC7 722 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 EFCAB13Q8IY85 973 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 LSM14AQ8ND56 463 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 FAM151AQ8WW52 585 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 STRBPQ96SI9 672 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TXLNGYQ9BZA5 131 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TRIM31Q9BZY9 425 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TANGO6Q9C0B7 1094 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 GREM2Q9H772 168 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 VCPKMTQ9H867 229 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 GOLGA6AQ9NYA3 693 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TMOD2Q9NZR1 351 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TRMT112Q9UI30 125 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TTI1O43156 1089 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 EFCAB14O75071 495 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 ZNF211Q13398 564 aaPredicted RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 PPP6R3Q5H9R7 873 aaPredicted RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 EMC10Q5UCC4 262 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 ZC3H14Q6PJT7 736 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 VSTM1Q6UX27 236 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 LRRC55Q6ZSA7 311 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TRIM74Q86UV6 250 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TRIM73Q86UV7 250 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 RNF135Q8IUD6 432 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 CCDC105Q8IYK2 499 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 LRRC34Q8IZ02 419 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 KRI1Q8N9T8 703 aaKnown RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 CLPTM1LQ96KA5 538 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 EGLN2Q96KS0 407 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 OSBPL9Q96SU4 736 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 DENND2DQ9H6A0 471 aaPredicted RBP3.4□□□□□ -1.87
RGPD3-202ENST00000409886 BLOC1S4Q9NUP1 217 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 TBC1D30Q9Y2I9 924 aa3.4□□□□□ -1.87
RGPD3-202ENST00000409886 DOCK3Q8IZD9 2030 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 GRID2IPA4D2P6 1211 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 CAPN8A6NHC0 703 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 H3BQV1 296 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PDE8AO60658 829 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PARNO95453 639 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 HOXB7P09629 217 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 GRB14Q14449 540 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 FASTKD3Q14CZ7 662 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 BRD3Q15059 726 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 ZNF528Q3MIS6 628 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 TAF3Q5VWG9 929 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PDXDC1Q6P996 788 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 UTS2BQ765I0 119 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 ECHDC2Q86YB7 292 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 NOSTRINQ8IVI9 506 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 LCORLQ8N3X6 602 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PLBD2Q8NHP8 589 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 FAM71BQ8TC56 605 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 EZH1Q92800 747 aaPredicted RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 SLC35B4Q969S0 331 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PBKQ96KB5 322 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 CABS1Q96KC9 395 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PRDM5Q9NQX1 630 aaPredicted RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PAG1Q9NWQ8 432 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 DNMT3BQ9UBC3 853 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 DBR1Q9UK59 544 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PIEZO1Q92508 2521 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 CTNND1O60716 968 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 TACC1O75410 805 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 FAM107AO95990 144 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PDHA1P08559 390 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 SLC9A1P19634 815 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 VARSP26640 1264 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 ICAM3P32942 547 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 LIMK1P53667 647 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 MAGOHP61326 146 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 CCNA1P78396 465 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 PDIA5Q14554 519 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 SLC5A9Q2M3M2 681 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 FAM133BQ5BKY9 247 aaKnown RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 TMEM67Q5HYA8 995 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 HP1BP3Q5SSJ5 553 aaPredicted RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 IER5LQ5T953 404 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 C16orf59Q7L2K0 433 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 EFCAB3Q8N7B9 438 aa3.39□□□□□ -1.87
RGPD3-202ENST00000409886 ENAHQ8N8S7 591 aaPredicted RBP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 GPKOWQ92917 476 aaPredicted RBP eCLIP3.39□□□□□ -1.87
RGPD3-202ENST00000409886 MAGOHBQ96A72 148 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms