RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ELMO3Q96BJ8 720 aa13.51□□□□□ -0.25
CHMP3-204ENST00000409727 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
CHMP3-204ENST00000409727 GCOM2Q9BZD3 368 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-204ENST00000409727 PTPRHQ9HD43 1115 aa13.51□□□□□ -0.25
CHMP3-204ENST00000409727 SIX2Q9NPC8 291 aa13.51□□□□□ -0.25
CHMP3-204ENST00000409727 AJAP1Q9UKB5 411 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-204ENST00000409727 CNTNAP2Q9UHC6 1331 aa13.51□□□□□ -0.25
CHMP3-204ENST00000409727 OGTO15294 1046 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 TSPAN1O60635 241 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 N4BP1O75113 896 aaKnown RBP13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PROZP22891 400 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PRMT2P55345 433 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 NKX3-2P78367 333 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 ARID5AQ03989 594 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 CETN1Q12798 172 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PSMD6Q15008 389 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
CHMP3-204ENST00000409727 FAM187BQ17R55 369 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 DPY19L2P1Q6NXN4 242 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 WDR59Q6PJI9 974 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 CYP26C1Q6V0L0 522 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 SRGAP1Q7Z6B7 1085 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 TMEM40Q8WWA1 233 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 NAA15Q9BXJ9 866 aaKnown RBP13.5□□□□□ -0.25
CHMP3-204ENST00000409727 CDT1Q9H211 546 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PDZD7Q9H5P4 517 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PLCB1Q9NQ66 1216 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 TNFSF13BQ9Y275 285 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PTPRJQ12913 1337 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 ZNF500O60304 480 aaPredicted RBP13.5□□□□□ -0.25
CHMP3-204ENST00000409727 FAM189A1O60320 539 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 CLSTN1O94985 981 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 CST5P28325 142 aaPredicted RBP13.5□□□□□ -0.25
CHMP3-204ENST00000409727 HOXC8P31273 242 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 ACLYP53396 1101 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 KRT39Q6A163 491 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 TMTC1Q8IUR5 882 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 ZNF516Q92618 1163 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 SPAG5Q96R06 1193 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 TMEM8AQ9HCN3 771 aa13.5□□□□□ -0.25
CHMP3-204ENST00000409727 GRIN2DO15399 1336 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 PLEKP08567 350 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-204ENST00000409727 CTSHP09668 335 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 PNMA6AP0CW24 399 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-204ENST00000409727 DARSP14868 501 aaKnown RBP13.49□□□□□ -0.25
CHMP3-204ENST00000409727 CDC42EP1Q00587 391 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 BIRC3Q13489 604 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 SFMBT2Q5VUG0 894 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 LHX8Q68G74 356 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 IQCEQ6IPM2 695 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 SV2AQ7L0J3 742 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
CHMP3-204ENST00000409727 EHBP1Q8NDI1 1231 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 TAS1R2Q8TE23 839 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 SEMA4DQ92854 862 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 WNT8BQ93098 351 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 SCN10AQ9Y5Y9 1956 aa13.49□□□□□ -0.25
CHMP3-204ENST00000409727 EIF4BP23588 611 aaKnown RBP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 SNX17Q15036 470 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 PTGISQ16647 500 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 EPC2Q52LR7 807 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 PHLDB3Q6NSJ2 640 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 TAF2Q6P1X5 1199 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 PI4K2AQ9BTU6 479 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 EDEM3Q9BZQ6 932 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 UNC93B1Q9H1C4 597 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 DNAJC12Q9UKB3 198 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 P4HA2O15460 535 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 CXCL8P10145 99 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 FECHP22830 423 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 C1QTNF8P60827 252 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 HSP90AA2PQ14568 343 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 MEA1Q16626 185 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 ARHGAP44Q17R89 818 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 BRSK2Q8IWQ3 736 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 ACRBPQ8NEB7 543 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 FBXL13Q8NEE6 735 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 OR5B17Q8NGF7 314 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 CGRRF1Q99675 332 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 ADPGKQ9BRR6 497 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 NHEJ1Q9H9Q4 299 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 UBE2TQ9NPD8 197 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 TRMT13Q9NUP7 481 aaKnown RBP13.48□□□□□ -0.25
CHMP3-204ENST00000409727 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 APEX2Q9UBZ4 518 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
CHMP3-204ENST00000409727 A0A1B0GUA9 196 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 M0QZ92 97 aa13.47□□□□□ -0.25
CHMP3-204ENST00000409727 NPTXRO95502 500 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms