RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 MBTPS1Q14703 1052 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 C1orf53Q5VUE5 145 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 SLC27A1Q6PCB7 646 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 TMC6Q7Z403 805 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 TMEM192Q8IY95 271 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 PARD3BQ8TEW8 1205 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 ADPGKQ9BRR6 497 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 EIF2AQ9BY44 585 aaKnown RBP18.3■□□□□ 0.52
SSB-202ENST00000409333 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 RBAKQ9NYW8 714 aaPredicted RBP18.3■□□□□ 0.52
SSB-202ENST00000409333 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
SSB-202ENST00000409333 TLR3O15455 904 aaKnown RBP18.3■□□□□ 0.52
SSB-202ENST00000409333 CD52P31358 61 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 TLE2Q04725 743 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 PPP2R3AQ06190 1150 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 FKBP15Q5T1M5 1219 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 PPP1R9BQ96SB3 815 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 POP1Q99575 1024 aaKnown RBP18.3■□□□□ 0.52
SSB-202ENST00000409333 PADI3Q9ULW8 664 aa18.3■□□□□ 0.52
SSB-202ENST00000409333 LRRIQ3A6PVS8 624 aaPredicted RBP18.29■□□□□ 0.52
SSB-202ENST00000409333 KLK7P49862 253 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 MCCD1P59942 119 aaPredicted RBP18.29■□□□□ 0.52
SSB-202ENST00000409333 FAAP100Q0VG06 881 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 DCAF4L1Q3SXM0 396 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 BRSK2Q8IWQ3 736 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 FAM84AQ96KN4 292 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 PDE11AQ9HCR9 933 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 ERVK-5Q9HDB9 667 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 TOPORSQ9NS56 1045 aaPredicted RBP18.29■□□□□ 0.52
SSB-202ENST00000409333 ATP11BQ9Y2G3 1177 aa18.29■□□□□ 0.52
SSB-202ENST00000409333 UMODL1Q5DID0 1318 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 STAG3L1P0CL83 205 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 DLATP10515 647 aaKnown RBP18.28■□□□□ 0.52
SSB-202ENST00000409333 SELPP16109 830 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 PPP3CAQ08209 521 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 PAK2Q13177 524 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 BFSP2Q13515 415 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 PSMD6Q15008 389 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 SYCP1Q15431 976 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 ENOX2Q16206 610 aaKnown RBP18.28■□□□□ 0.52
SSB-202ENST00000409333 LRRC26Q2I0M4 334 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 CBWD6Q4V339 395 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 CBWD3Q5JTY5 395 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 CBWD5Q5RIA9 395 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 UBXN11Q5T124 520 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 LRRC8DQ7L1W4 858 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 TMC2Q8TDI7 906 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 TOX2Q96NM4 488 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 PTPRJQ12913 1337 aa18.28■□□□□ 0.52
SSB-202ENST00000409333 TDRD15B5MCY1 1934 aaKnown RBP18.27■□□□□ 0.52
SSB-202ENST00000409333 A0A1W2PQC6 194 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 DCDC2CA8MYV0 355 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 GPR182O15218 404 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 MEFVO15553 781 aaPredicted RBP18.27■□□□□ 0.52
SSB-202ENST00000409333 CXCL8P10145 99 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 FMO5P49326 533 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 HSP90AA2PQ14568 343 aaPredicted RBP18.27■□□□□ 0.52
SSB-202ENST00000409333 LMBRD2Q68DH5 695 aaPredicted RBP18.27■□□□□ 0.52
SSB-202ENST00000409333 SPECC1LQ69YQ0 1117 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.52
SSB-202ENST00000409333 NECAB2Q7Z6G3 386 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 ERGIC2Q96RQ1 377 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 CRACR2AQ9BSW2 395 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 SQORQ9Y6N5 450 aa18.27■□□□□ 0.52
SSB-202ENST00000409333 MICAL3Q7RTP6 2002 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 PITPNM1O00562 1244 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 EN2P19622 333 aaPredicted RBP18.27■□□□□ 0.51
SSB-202ENST00000409333 GCLMP48507 274 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 KCNMA1Q12791 1236 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 FAM212AQ96EL1 285 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 FNBP1Q96RU3 617 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 TRIM6Q9C030 488 aaPredicted RBP18.27■□□□□ 0.51
SSB-202ENST00000409333 TMX1Q9H3N1 280 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 NXF3Q9H4D5 531 aaKnown RBP18.27■□□□□ 0.51
SSB-202ENST00000409333 SIK3Q9Y2K2 1263 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 HES2Q9Y543 173 aa18.27■□□□□ 0.51
SSB-202ENST00000409333 ITIH6Q6UXX5 1313 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 CLTAP09496 248 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 GRM5P41594 1212 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 MYL7Q01449 175 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 ENPEPQ07075 957 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 APBB1IPQ7Z5R6 666 aaPredicted RBP18.26■□□□□ 0.51
SSB-202ENST00000409333 USP37Q86T82 979 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 CCDC51Q96ER9 411 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 RPF1Q9H9Y2 349 aaKnown RBP18.26■□□□□ 0.51
SSB-202ENST00000409333 SNTG2Q9NY99 539 aa18.26■□□□□ 0.51
SSB-202ENST00000409333 MGEA5O60502 916 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 CAPN2P17655 700 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 TNNI1P19237 187 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 CLDN10P78369 228 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 ZNF516Q92618 1163 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 PPP1R12CQ9BZL4 782 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 TMEM117Q9H0C3 514 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 HIPK3Q9H422 1215 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 CHST12Q9NRB3 414 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 MXI1P50539 228 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 GPNMBQ14956 572 aa18.25■□□□□ 0.51
SSB-202ENST00000409333 KYAT1Q16773 422 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms