RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 TMEM143Q96AN5 459 aa14.36□□□□□ -0.11
CHRNA1-203ENST00000409219 CLSTN3Q9BQT9 956 aa14.36□□□□□ -0.11
CHRNA1-203ENST00000409219 APOL6Q9BWW8 343 aa14.36□□□□□ -0.11
CHRNA1-203ENST00000409219 PLA2G2FQ9BZM2 168 aa14.36□□□□□ -0.11
CHRNA1-203ENST00000409219 CHRDQ9H2X0 955 aa14.36□□□□□ -0.11
CHRNA1-203ENST00000409219 NXF3Q9H4D5 531 aaKnown RBP14.36□□□□□ -0.11
CHRNA1-203ENST00000409219 HCFC1R1Q9NWW0 138 aa14.36□□□□□ -0.11
CHRNA1-203ENST00000409219 TSPAN1O60635 241 aa14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 ERLIN2O94905 339 aa14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 EXOSC10Q01780 885 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 LAMTOR4Q0VGL1 99 aa14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 CELF5Q8N6W0 485 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 PSPC1Q8WXF1 523 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 SLC7A3Q8WY07 619 aa14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 CPB2Q96IY4 423 aa14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 DHX33Q9H6R0 707 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 BMP2KQ9NSY1 1161 aaPredicted RBP14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 CEP295Q9C0D2 2601 aa14.35□□□□□ -0.11
CHRNA1-203ENST00000409219 TICRRQ7Z2Z1 1910 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 XYLBO75191 536 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 ECI2O75521 394 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 POU2F2P09086 479 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 USP11P51784 963 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 RCAN1P53805 252 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 NRLP54845 237 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 CSRP2Q16527 193 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 PABPC1LQ4VXU2 614 aaKnown RBP14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 POTEHQ6S545 545 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 HASPINQ8TF76 798 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 PIK3R5Q8WYR1 880 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 DNMT3BQ9UBC3 853 aaKnown RBP14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 GIT1Q9Y2X7 761 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 SF3B1O75533 1304 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 WDFY3Q8IZQ1 3526 aa14.34□□□□□ -0.11
CHRNA1-203ENST00000409219 ADAM12O43184 909 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 TDP2O95551 362 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 PSMC5P62195 406 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 GRIK3Q13003 919 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 HSP90AA2PQ14568 343 aaPredicted RBP14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 PSMD5Q16401 504 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 Q4G0T1 1027 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 MAMSTRQ6ZN01 415 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 LNX1Q8TBB1 728 aaPredicted RBP14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 BICD2Q8TD16 824 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 TBCKQ8TEA7 893 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 DNASE1L2Q92874 299 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 CCDC51Q96ER9 411 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 CSRNP2Q9H175 543 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 WRAP73Q9P2S5 460 aaPredicted RBP14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 KCNH3Q9ULD8 1083 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 GREB1Q4ZG55 1949 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 ZZEF1O43149 2961 aa14.33□□□□□ -0.12
CHRNA1-203ENST00000409219 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 AKAP5P24588 427 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 AXLP30530 894 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 SHC2P98077 582 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 SIM2Q14190 667 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 PPP2R5DQ14738 602 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 N4BP2L1Q5TBK1 243 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 FERMT3Q86UX7 667 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 ETNPPLQ8TBG4 499 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 DDX1Q92499 740 aaKnown RBP14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 IER2Q9BTL4 223 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 TTPALQ9BTX7 342 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 NAP1L2Q9ULW6 460 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 ZFYVE26Q68DK2 2539 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 ZMYM2Q9UBW7 1377 aa14.32□□□□□ -0.12
CHRNA1-203ENST00000409219 EML1O00423 815 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 TADA2AO75478 443 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 KIF4AO95239 1232 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 FCARP24071 287 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 CCR3P51677 355 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 SATB1Q01826 763 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 SRSF5Q13243 272 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 EMC2Q15006 297 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 AMHR2Q16671 573 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 AXDND1Q5T1B0 1012 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 FAM171A1Q5VUB5 890 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 TANGO2Q6ICL3 276 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 CEP57Q86XR8 500 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 CCDC148Q8NFR7 591 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 MCRS1Q96EZ8 462 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 CEP170P1Q96L14 293 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 ESYT1Q9BSJ8 1104 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 TRIM6Q9C030 488 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 MRPS23Q9Y3D9 190 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 NID2Q14112 1375 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 PRPF3O43395 683 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 CEBPBP17676 345 aa14.31□□□□□ -0.12
CHRNA1-203ENST00000409219 ARF4P18085 180 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms