RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 CELF3Q5SZQ8 465 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 NFRKBQ6P4R8 1299 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GLYCTKQ8IVS8 523 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GPD1LQ8N335 351 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PPM1KQ8N3J5 372 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 RNF10Q8N5U6 811 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GPRC5AQ8NFJ5 357 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TMEM174Q8WUU8 243 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 KAT5Q92993 513 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ZBTB45Q96K62 511 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 FAM84AQ96KN4 292 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 NIFKQ9BYG3 293 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 WBP1LQ9NX94 342 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 WDR90Q96KV7 1748 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PTPRFP10586 1907 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF233A6NK53 670 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 BTBD19C9JJ37 291 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 H0YCG3 227 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 P4HA2O15460 535 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PALMO75781 387 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 SEC31AO94979 1220 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 FTCDO95954 541 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 H2AFZP0C0S5 128 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 CCDC172P0C7W6 258 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 HARSP12081 509 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TNFAIP3P21580 790 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GARTP22102 1010 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ARL2P36404 184 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GGCXP38435 758 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 NAMPTP43490 491 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ACOT2P49753 483 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 CYP24A1Q07973 514 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 BMS1Q14692 1282 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PTPROQ16827 1216 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 EPC2Q52LR7 807 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 C10orf76Q5T2E6 689 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GJC2Q5T442 439 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 LMBRD2Q68DH5 695 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 KRT39Q6A163 491 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 KCNV1Q6PIU1 500 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TMCO3Q6UWJ1 677 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 H2AFVQ71UI9 128 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 LOXHD1Q8IVV2 1947 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 LNX1Q8TBB1 728 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 COG1Q8WTW3 980 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF668Q96K58 619 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GPR20Q99678 358 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 CCDC94Q9BW85 323 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TARS2Q9BW92 718 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GPR88Q9GZN0 384 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 KCNG1Q9UIX4 513 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 SNX12Q9UMY4 172 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 OTOFQ9HC10 1997 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 C3orf80F5H4A9 247 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 PDE2AO00408 941 aaPredicted RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 CELF2O95319 508 aaKnown RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 SRGAP2CP0DJJ0 459 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 CETPP11597 493 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 ABCB4P21439 1286 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 CCNA1P78396 465 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 CBX1P83916 185 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 TTLL4Q14679 1199 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 TARBP2Q15633 366 aaKnown RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 SEZ6Q53EL9 994 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 SV2AQ7L0J3 742 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 ARMCX2Q7L311 632 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 USP37Q86T82 979 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 RETREG3Q86VR2 466 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 LRRC71Q8N4P6 559 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 TAS1R2Q8TE23 839 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 TRAPPC12Q8WVT3 735 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 PRPF31Q8WWY3 499 aaKnown RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 BRI3BPQ8WY22 251 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 SEMA4DQ92854 862 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 MFSD14AQ96MC6 490 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 FBXL18Q96ME1 805 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 FNBP1Q96RU3 617 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 CEP89Q96ST8 783 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 OSBPL9Q96SU4 736 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 TLR10Q9BXR5 811 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 GOLPH3Q9H4A6 298 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 RRAGCQ9HB90 399 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 GBA2Q9HCG7 927 aaPredicted RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF446Q9NWS9 450 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 ANKFY1Q9P2R3 1169 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 AGO2Q9UKV8 859 aaKnown RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 PACSIN2Q9UNF0 486 aaPredicted RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 HYOU1Q9Y4L1 999 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 MYH9P35579 1960 aaKnown RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 MYH10P35580 1976 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 LCTP09848 1927 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 ASB14A6NK59 587 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 MAFO75444 373 aaPredicted RBP4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 CLSTN1O94985 981 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 TNNI1P19237 187 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 ADORA2AP29274 412 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 RFC5P40937 340 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 GTF2A2P52657 109 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 GALCP54803 685 aa4.3□□□□□ -1.72
LRRTM4-201ENST00000409088 NLRP11P59045 1033 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms