RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF568Q3ZCX4 644 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 RARS2Q5T160 578 aaKnown RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 RINT1Q6NUQ1 792 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 FUT10Q6P4F1 479 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 C15orf39Q6ZRI6 1047 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 CDR2LQ86X02 465 aaPredicted RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 RNF168Q8IYW5 571 aaPredicted RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 SYT2Q8N9I0 419 aaPredicted RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 TDRD5Q8NAT2 981 aaKnown RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 CMASQ8NFW8 434 aaPredicted RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 SLC22A17Q8WUG5 538 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 AUTS2Q8WXX7 1259 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 STAMQ92783 540 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 ACSF2Q96CM8 615 aaPredicted RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 INTS4Q96HW7 963 aaKnown RBP9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 MFSD14AQ96MC6 490 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 KLHL5Q96PQ7 755 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 RHOBTB2Q9BYZ6 727 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 KCNH6Q9H252 994 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 PLEKHA4Q9H4M7 779 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 MARCH5Q9NX47 278 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 SNTG2Q9NY99 539 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 FNIP2Q9P278 1114 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 MUTYHQ9UIF7 546 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 ODF2LQ9ULJ1 636 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 USTQ9Y2C2 406 aa9.98□□□□□ -0.81
SNORD88A-201ENST00000408314 PP2D1A8MPX8 630 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 C2CD2LO14523 706 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 B4GALT3O60512 393 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 CNPP09543 421 aaKnown RBP9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 MCF2P10911 925 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 PLS3P13797 630 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 EPCAMP16422 314 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 GRM5P41594 1212 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 CLCN4P51793 760 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 RBM10P98175 930 aaKnown RBP9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 KYAT1Q16773 422 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 TMEM119Q4V9L6 283 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 CCDC149Q6ZUS6 474 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 C1orf186Q6ZWK4 172 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 OTOP3Q7RTS5 596 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 EDAQ92838 391 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 TCHPQ9BT92 498 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 KIFC3Q9BVG8 833 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 RUSC1Q9BVN2 902 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 VN1R3Q9BXE9 311 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 RXFP1Q9HBX9 757 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 TSHZ2Q9NRE2 1034 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 ARHGAP28Q9P2N2 729 aa9.97□□□□□ -0.81
SNORD88A-201ENST00000408314 FAM86C2PA6NEL3 165 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 TMEM189-UBE2V1I3L0A0 370 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 TEX28O15482 410 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 LILRB3O75022 631 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 TBCAO75347 108 aaKnown RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 TOM1L1O75674 476 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 EFEMP2O95967 443 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 KRT18P05783 430 aaKnown RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 PLA2G4BP0C869 781 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 SIGLEC14Q08ET2 396 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 MTMR3Q13615 1198 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 PTPN21Q16825 1174 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 KIAA0319Q5VV43 1072 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 MPZL3Q6UWV2 235 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 ZPBP2Q6X784 338 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 GPR149Q86SP6 731 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 SUGP1Q8IWZ8 645 aaKnown RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 UBALD2Q8IYN6 164 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 GSTCDQ8NEC7 633 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 FAM122AQ96E09 287 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 BICD1Q96G01 975 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 ACO2Q99798 780 aaKnown RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 PRRX2Q99811 253 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 NTPCRQ9BSD7 190 aaKnown RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 TTPALQ9BTX7 342 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 MMTAG2Q9BU76 263 aaKnown RBP9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 APOL5Q9BWW9 433 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 MAN1C1Q9NR34 630 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 CHST7Q9NS84 486 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 ZDHHC7Q9NXF8 308 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 CCDC39Q9UFE4 941 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 GDAQ9Y2T3 454 aa9.96□□□□□ -0.82
SNORD88A-201ENST00000408314 CASTOR2A6NHX0 329 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 K7ELQ4 463 aaPredicted RBP9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 PTGESO14684 152 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 SLC16A4O15374 487 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 XPOTO43592 962 aaKnown RBP9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 FAM13AO94988 1023 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 BRD1O95696 1058 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 CDC25AP30304 524 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 SLC12A3P55017 1021 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 MAPK7Q13164 816 aa9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 NOLC1Q14978 699 aaKnown RBP eCLIP9.95□□□□□ -0.82not detected■□□□□ 10.5
SNORD88A-201ENST00000408314 SF3A1Q15459 793 aaKnown RBP9.95□□□□□ -0.82
SNORD88A-201ENST00000408314 IL17AQ16552 155 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms