RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CHST7Q9NS84 486 aa21.23■□□□□ 0.99
SMARCB1-204ENST00000407422 ADAM28Q9UKQ2 775 aa21.23■□□□□ 0.99
SMARCB1-204ENST00000407422 HCN4Q9Y3Q4 1203 aa21.23■□□□□ 0.99
SMARCB1-204ENST00000407422 CASTOR2A6NHX0 329 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 DSG1Q02413 1049 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 DMP1Q13316 513 aaPredicted RBP21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 TUSC3Q13454 348 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 CUL4AQ13619 759 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 NAB2Q15742 525 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 ARL6IP4Q66PJ3 421 aaKnown RBP21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 HFE2Q6ZVN8 426 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 TAS1R3Q7RTX0 852 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 NECTIN4Q96NY8 510 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 MUC6Q6W4X9 2439 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 THP07101 528 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 MTHFRP42898 656 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 HSP90AA2PQ14568 343 aaPredicted RBP21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 DCAF4L1Q3SXM0 396 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 KIAA1841Q6NSI8 718 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 HASPINQ8TF76 798 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 DRC1Q96MC2 740 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 RIPOR3Q96MK2 946 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 RXFP1Q9HBX9 757 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 KMT5AQ9NQR1 393 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 ARHGAP28Q9P2N2 729 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 SSX2IPQ9Y2D8 614 aa21.22■□□□□ 0.99
SMARCB1-204ENST00000407422 TADA2AO75478 443 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 MYBP10242 640 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 ZXDAP98168 799 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 ATAT1Q5SQI0 421 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 ZNF318Q5VUA4 2279 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 PHLPP2Q6ZVD8 1323 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 DENND4AQ7Z401 1863 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 ACO2Q99798 780 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 SFXN1Q9H9B4 322 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 TNFSF13BQ9Y275 285 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 NR2E1Q9Y466 385 aa21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 MTCL1Q9Y4B5 1905 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-204ENST00000407422 SPDYE4A6NLX3 237 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 C2CD4DB7Z1M9 353 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 SLC16A4O15374 487 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 KIF4AO95239 1232 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 ADH1AP07327 375 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 GUCY2CP25092 1073 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 SLC12A3P55017 1021 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 USP41Q3LFD5 358 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 TMEM119Q4V9L6 283 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 CEP120Q8N960 986 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 SYT2Q8N9I0 419 aaPredicted RBP21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 TARS2Q9BW92 718 aaKnown RBP21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 NT5C3AQ9H0P0 336 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 TMEM134Q9H6X4 195 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 PTPRHQ9HD43 1115 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 MAN1C1Q9NR34 630 aa21.2■□□□□ 0.98
SMARCB1-204ENST00000407422 VWA8A3KMH1 1905 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 NPHP3-ACAD11A0A0J9YXS1 232 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 PLA2G4BP0C869 781 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 SPATA31D3P0C874 917 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 GRIN1Q05586 938 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 GLRA4Q5JXX5 417 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 TRIM67Q6ZTA4 783 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 SPATA31D4Q6ZUB0 917 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 BRAPQ7Z569 592 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 GPR149Q86SP6 731 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 LRRC15Q8TF66 581 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 RIN2Q8WYP3 895 aaPredicted RBP21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 CDK5RAP3Q96JB5 506 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 MRPL4Q9BYD3 311 aaKnown RBP21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 BACH2Q9BYV9 841 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 CDT1Q9H211 546 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 C17orf75Q9HAS0 396 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 ZDBF2Q9HCK1 2354 aa21.19■□□□□ 0.98
SMARCB1-204ENST00000407422 VPS37CA5D8V6 355 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 RPL17P18621 184 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 IGFBP6P24592 240 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 PALB2Q86YC2 1186 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 GLYCTKQ8IVS8 523 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 NTPCRQ9BSD7 190 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 TIPINQ9BVW5 301 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 RBM19Q9Y4C8 960 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 CITO14578 2027 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 SF3B1O75533 1304 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 GLUD1P00367 558 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 OSTNP61366 133 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 CACNB1Q02641 598 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 SF3A1Q15459 793 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 PTPN21Q16825 1174 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 ZNF568Q3ZCX4 644 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 ARSHQ5FYA8 562 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 RTP2Q5QGT7 225 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 PRSS55Q6UWB4 352 aaPredicted RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 ZBTB33Q86T24 672 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 AK8Q96MA6 479 aa21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 PPP1R10Q96QC0 940 aaKnown RBP21.18■□□□□ 0.98
SMARCB1-204ENST00000407422 TMEM221A6NGB7 291 aa21.17■□□□□ 0.98
SMARCB1-204ENST00000407422 M0R296 226 aa21.17■□□□□ 0.98
SMARCB1-204ENST00000407422 PLS3P13797 630 aa21.17■□□□□ 0.98
SMARCB1-204ENST00000407422 KCTD17Q8N5Z5 321 aa21.17■□□□□ 0.98
SMARCB1-204ENST00000407422 ABLIM1O14639 778 aa21.16■□□□□ 0.98
SMARCB1-204ENST00000407422 RFPL2O75678 378 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms