RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 GPR62Q9BZJ7 368 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 FOXQ1Q9C009 403 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 KCNMB3Q9NPA1 279 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 SPATA6Q9NWH7 488 aaPredicted RBP13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 MIOSQ9NXC5 875 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 NCDNQ9UBB6 729 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 HES2Q9Y543 173 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 PCDHGA2Q9Y5H1 932 aa13.65□□□□□ -0.22
APOBEC3B-204ENST00000407298 HSP90AA2PQ14568 343 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 MLF2Q15773 248 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 RSPO4Q2I0M5 234 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 SLC44A4Q53GD3 710 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 PPM1LQ5SGD2 360 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 RTL10Q7L3V2 364 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 GRASPQ7Z6J2 395 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 SUMF1Q8NBK3 374 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 TTPALQ9BTX7 342 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 NFKBIZQ9BYH8 718 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 PARP2Q9UGN5 583 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 CACNA1BQ00975 2339 aa13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 TPRP12270 2363 aaKnown RBP13.64□□□□□ -0.23
APOBEC3B-204ENST00000407298 FANCMQ8IYD8 2048 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 PRR5-ARHGAP8B1AHC4 643 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 DGAT1O75907 488 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 ARF4P18085 180 aaPredicted RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 ARHGAP8P85298 464 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 UBXN2BQ14CS0 331 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 UVSSAQ2YD98 709 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 NCAPH2Q6IBW4 605 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 PARM1Q6UWI2 310 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 TPH2Q8IWU9 490 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 DCLK2Q8N568 766 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 FGF14Q92915 247 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 B3GALT6Q96L58 329 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 DDX23Q9BUQ8 820 aaKnown RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 NXF3Q9H4D5 531 aaKnown RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 RGL1Q9NZL6 768 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 WRAP73Q9P2S5 460 aaPredicted RBP13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 FBXW11Q9UKB1 542 aa13.63□□□□□ -0.23
APOBEC3B-204ENST00000407298 TDRD15B5MCY1 1934 aaKnown RBP13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 FAM170BA6NMN3 283 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 F8W810 466 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 CDKL5O76039 1030 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 POU2F2P09086 479 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 GLULP15104 373 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 RPL17P18621 184 aaKnown RBP13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 AKAP5P24588 427 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 CSTF1Q05048 431 aaKnown RBP13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 MBTD1Q05BQ5 628 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 TUSC3Q13454 348 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 RUFY3Q7L099 469 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 MAML2Q8IZL2 1156 aaPredicted RBP13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 GSTCDQ8NEC7 633 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 FGF13Q92913 245 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 DYDC2Q96IM9 177 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZSCAN32Q9NX65 697 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 KCNH3Q9ULD8 1083 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 POLIQ9UNA4 740 aa13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 MRPS17Q9Y2R5 130 aaKnown RBP13.62□□□□□ -0.23
APOBEC3B-204ENST00000407298 DNAH14Q0VDD8 3507 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 GPR179Q6PRD1 2367 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 A0A1B0GUA9 196 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 POTEMA6NI47 508 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 TBC1D4O60343 1298 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 LYPLA2O95372 231 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 NPTXRO95502 500 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 C8AP07357 584 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 ARL2P36404 184 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 LMNB2Q03252 620 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 TOB2Q14106 344 aaPredicted RBP13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 CTTNQ14247 550 aaKnown RBP13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 NPY5RQ15761 445 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 PSMD5Q16401 504 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 AMHR2Q16671 573 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 FAM171A1Q5VUB5 890 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 PRSS55Q6UWB4 352 aaPredicted RBP13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 CEP57Q86XR8 500 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 HAS1Q92839 578 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 CLSTN3Q9BQT9 956 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 RPP25Q9BUL9 199 aaKnown RBP13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 PHF20Q9BVI0 1012 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 FAM126AQ9BYI3 521 aaPredicted RBP13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 XPNPEP1Q9NQW7 623 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 KLK14Q9P0G3 267 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms