RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 SLC12A3P55017 1021 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 IL9RQ01113 521 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SNX1Q13596 522 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF710Q8N1W2 664 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ARHGAP24Q8N264 748 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NME8Q8N427 588 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RBBP8NLQ8NC74 664 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 GIMAP7Q8NHV1 300 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 BCAS4Q8TDM0 211 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 HAS1Q92839 578 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 KIF12Q96FN5 646 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 TNIP3Q96KP6 325 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 FOXP3Q9BZS1 431 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NIF3L1Q9GZT8 377 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 INTS9Q9NV88 658 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 AIPL1Q9NZN9 384 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 HDAC6Q9UBN7 1215 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 GTF3C4Q9UKN8 822 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 UBIAD1Q9Y5Z9 338 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 MAPK13O15264 365 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 STRNO43815 780 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 INHBAP08476 426 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ZFXP17010 805 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SDC4P31431 198 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ACOT2P49753 483 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RASSF2P50749 326 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SLC12A2P55011 1212 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SLC7A5Q01650 507 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NFX1Q12986 1120 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 DGKDQ16760 1214 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 DCAF4L1Q3SXM0 396 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SPOUT1Q5T280 376 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ARHGEF18Q6ZSZ5 1173 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RSRC2Q7L4I2 434 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 VSIG1Q86XK7 387 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RCOR2Q8IZ40 523 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SLC35G2Q8TBE7 412 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 HNRNPLLQ8WVV9 542 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RNPC3Q96LT9 517 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 TARS2Q9BW92 718 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 IRX2Q9BZI1 471 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 GPRC5DQ9NZD1 345 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 KLHL14Q9P2G3 628 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NAGPAQ9UK23 515 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RGPD2P0DJD1 1756 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NFASCO94856 1347 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 M0QYV0 167 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 PFDN6O15212 129 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 TOM1L1O75674 476 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 AKAP3O75969 853 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 LYPLA2O95372 231 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ZBED1O96006 694 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 KLK7P49862 253 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 YWHAGP61981 247 aaKnown RBP eCLIP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 HERVK_113P62684 666 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NOP14P78316 857 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RNASELQ05823 741 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 PIGHQ14442 188 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 TMEM132DQ14C87 1099 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 CCDC6Q16204 474 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF394Q53GI3 561 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 PAPD7Q5XG87 772 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 EFCAB12Q6NXP0 572 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 CATSPERGQ6ZRH7 1159 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 VSIG10LQ86VR7 867 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 ANKRD42Q8N9B4 389 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 CCDC110Q8TBZ0 833 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 COG1Q8WTW3 980 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 PPM1EQ8WY54 764 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 TBC1D31Q96DN5 1066 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 MRRFQ96E11 262 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 SENP7Q9BQF6 1050 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NUDT12Q9BQG2 462 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 CARD9Q9H257 536 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 RASSF4Q9H2L5 321 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 NGRNQ9NPE2 291 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 PPANQ9NQ55 473 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 KIAA1257Q9ULG3 409 aa5.05□□□□□ -1.6
PCDH11X-207ENST00000406881 DYNC1LI2O43237 492 aaPredicted RBP5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 CPP00450 1065 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 VEGFAP15692 232 aaPredicted RBP5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 MSH2P43246 934 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 ATP1A2P50993 1020 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 ARL4CP56559 192 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 PSMC6P62333 389 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 MEA1Q16626 185 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 TTC31Q49AM3 519 aaPredicted RBP5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 PLEKHH3Q7Z736 793 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 RIOX2Q8IUF8 465 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 PASD1Q8IV76 773 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 ATP8B4Q8TF62 1192 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 RNF139Q8WU17 664 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 C18orf8Q96DM3 657 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 PPP1R16BQ96T49 567 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 CGRRF1Q99675 332 aa5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 IPO11Q9UI26 975 aaKnown RBP5.04□□□□□ -1.6
PCDH11X-207ENST00000406881 SNX24Q9Y343 169 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms