RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 KLK14Q9P0G3 267 aa23.37■■□□□ 1.33
RHBDD3-202ENST00000406335 FNIP2Q9P278 1114 aa23.37■■□□□ 1.33
RHBDD3-202ENST00000406335 ADAM28Q9UKQ2 775 aa23.37■■□□□ 1.33
RHBDD3-202ENST00000406335 TBX3O15119 743 aa23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 NPTXRO95502 500 aa23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 RABEP1Q15276 862 aa23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 LIN9Q5TKA1 542 aa23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 GRASPQ7Z6J2 395 aaPredicted RBP23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 RNF168Q8IYW5 571 aaPredicted RBP23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 C8orf76Q96K31 380 aa23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 NXF3Q9H4D5 531 aaKnown RBP23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 ZFP37Q9Y6Q3 630 aaPredicted RBP23.36■■□□□ 1.33
RHBDD3-202ENST00000406335 ZMYND10O75800 440 aa23.35■■□□□ 1.33
RHBDD3-202ENST00000406335 C1RP00736 705 aa23.35■■□□□ 1.33
RHBDD3-202ENST00000406335 TMEM132AQ24JP5 1023 aa23.35■■□□□ 1.33
RHBDD3-202ENST00000406335 CDR2LQ86X02 465 aaPredicted RBP23.35■■□□□ 1.33
RHBDD3-202ENST00000406335 SLFN12Q8IYM2 578 aa23.35■■□□□ 1.33
RHBDD3-202ENST00000406335 RUBCNQ92622 972 aa23.35■■□□□ 1.33
RHBDD3-202ENST00000406335 FOXQ1Q9C009 403 aa23.35■■□□□ 1.33
RHBDD3-202ENST00000406335 ANHXE9PGG2 379 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 ARF4P18085 180 aaPredicted RBP23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 GPC5P78333 572 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 SPIRE1Q08AE8 756 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 GRIK3Q13003 919 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 SNW1Q13573 536 aaKnown RBP23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 HTR4Q13639 388 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 PPM1LQ5SGD2 360 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 PRSS55Q6UWB4 352 aaPredicted RBP23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 HASPINQ8TF76 798 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 SLC2A4RGQ9NR83 387 aa23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 SPATA6Q9NWH7 488 aaPredicted RBP23.34■■□□□ 1.33
RHBDD3-202ENST00000406335 SF3B1O75533 1304 aaKnown RBP eCLIP23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 KINO60870 393 aaKnown RBP23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 CD2BP2O95400 341 aaKnown RBP23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 EFEMP2O95967 443 aa23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 HMGN5P82970 282 aaKnown RBP23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 MBTD1Q05BQ5 628 aa23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 HSP90AA2PQ14568 343 aaPredicted RBP23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 PUM1Q14671 1186 aaKnown RBP eCLIP23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 SLC27A1Q6PCB7 646 aa23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 LILRA6Q6PI73 481 aa23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 PJA1Q8NG27 643 aa23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 BCO2Q9BYV7 579 aa23.33■■□□□ 1.33
RHBDD3-202ENST00000406335 DGAT1O75907 488 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 SLITRK3O94933 977 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 ATP2B1P20020 1258 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 POU5F1BQ06416 359 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 CAPSQ13938 189 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 UBXN2BQ14CS0 331 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 SAFBQ15424 915 aaKnown RBP eCLIP23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 PARM1Q6UWI2 310 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 GPR65Q8IYL9 337 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 DCLK2Q8N568 766 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 ASAP3Q8TDY4 903 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 EIF2AK1Q9BQI3 630 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 RPP25Q9BUL9 199 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 XPNPEP1Q9NQW7 623 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 CDH7Q9ULB5 785 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 DENND4AQ7Z401 1863 aa23.32■■□□□ 1.32
RHBDD3-202ENST00000406335 CCL16O15467 120 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 B4GALT5O43286 388 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 LAMTOR5O43504 91 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 XYLBO75191 536 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 NTHL1P78549 312 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 CALCRLQ16602 461 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 RTP2Q5QGT7 225 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 FAM171A1Q5VUB5 890 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 MTSS1LQ765P7 747 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 MAEAQ7L5Y9 396 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 FAM184AQ8NB25 1140 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 FBXO18Q8NFZ0 1043 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 FGF14Q92915 247 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 TTPALQ9BTX7 342 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 TMEM60Q9H2L4 133 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 PCDHA12Q9UN75 941 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 DMDP11532 3685 aa23.31■■□□□ 1.32
RHBDD3-202ENST00000406335 MED19A0JLT2 244 aaPredicted RBP23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 CASTOR2A6NHX0 329 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 LRRIQ4A6NIV6 560 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 NEMFO60524 1076 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 LRRN2O75325 713 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 C8AP07357 584 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 HNRNPA1P09651 372 aaKnown RBP eCLIP23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 STARD6P59095 220 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 PSMD5Q16401 504 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 TBC1D32Q96NH3 1257 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 POLR3FQ9H1D9 316 aaPredicted RBP23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 ANKEF1Q9NU02 776 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 DLGAP2Q9P1A6 1054 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 NCDNQ9UBB6 729 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 CACNG4Q9UBN1 327 aa23.3■■□□□ 1.32
RHBDD3-202ENST00000406335 KANSL1LA0AUZ9 987 aa23.29■■□□□ 1.32
RHBDD3-202ENST00000406335 GLRA2P23416 452 aa23.29■■□□□ 1.32
RHBDD3-202ENST00000406335 ARL2P36404 184 aa23.29■■□□□ 1.32
RHBDD3-202ENST00000406335 TUSC3Q13454 348 aa23.29■■□□□ 1.32
RHBDD3-202ENST00000406335 AMHR2Q16671 573 aa23.29■■□□□ 1.32
RHBDD3-202ENST00000406335 SLC44A4Q53GD3 710 aa23.29■■□□□ 1.32
RHBDD3-202ENST00000406335 POTEGQ6S5H5 508 aa23.29■■□□□ 1.32
RHBDD3-202ENST00000406335 IFNLR1Q8IU57 520 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms