RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ST3GAL5Q9UNP4 418 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 NOC2LQ9Y3T9 749 aaKnown RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 PCDHB13Q9Y5F0 798 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 ZNF292O60281 2723 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 K7ENM7 598 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 DNAJB1P25685 340 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 AXLP30530 894 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 MCM4P33991 863 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 NRIP1P48552 1158 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 NUBP1P53384 320 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 CUL4BQ13620 913 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 FRMD5Q7Z6J6 570 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 ZBTB33Q86T24 672 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 RBM23Q86U06 439 aaKnown RBP11.58□□□□□ -0.56
RPAIN-204ENST00000405578 FAM228AQ86W67 206 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 TMEM40Q8WWA1 233 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 BSNDQ8WZ55 320 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 RIPOR3Q96MK2 946 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 PLVAPQ9BX97 442 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
RPAIN-204ENST00000405578 TMEM134Q9H6X4 195 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 OLFML3Q9NRN5 406 aa11.58□□□□□ -0.56
RPAIN-204ENST00000405578 WDR87Q6ZQQ6 2873 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 FRMD3A2A2Y4 597 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 ACKR2O00590 384 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 SLC16A4O15374 487 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 KIF20AO95235 890 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 GCNT3O95395 438 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 RPN1P04843 607 aaKnown RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 ITGB1P05556 798 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 PRKCBP05771 671 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 SKIP12755 728 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 NCKAP1LP55160 1127 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 MBTD1Q05BQ5 628 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 PSMD2Q13200 908 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 PRPF4BQ13523 1007 aaKnown RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 FAM187BQ17R55 369 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 FAM26FQ5R3K3 315 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 NOTUMQ6P988 496 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 HAUS6Q7Z4H7 955 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 SFR1Q86XK3 245 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 GRAMD1CQ8IYS0 662 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 ADSSL1Q8N142 457 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 NKD2Q969F2 451 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 SMARCE1Q969G3 411 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 HVCN1Q96D96 273 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 CCDC51Q96ER9 411 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 KIFC3Q9BVG8 833 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 MRPL4Q9BYD3 311 aaKnown RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 FZD8Q9H461 694 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 AGO3Q9H9G7 860 aaKnown RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 ERVK-5Q9HDB9 667 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 ARHGAP28Q9P2N2 729 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 EXOC7Q9UPT5 735 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 PIN4Q9Y237 131 aaKnown RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 PCDHGC5Q9Y5F6 944 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 MRPL42Q9Y6G3 142 aaKnown RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 DMXL1Q9Y485 3027 aa11.57□□□□□ -0.56
RPAIN-204ENST00000405578 FNDC1Q4ZHG4 1894 aaPredicted RBP11.57□□□□□ -0.56
RPAIN-204ENST00000405578 EPG5Q9HCE0 2579 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 MED19A0JLT2 244 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 CSDE1O75534 798 aaKnown RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 ATF7P17544 494 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 SP100P23497 879 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 RBM10P98175 930 aaKnown RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 TWF2Q6IBS0 349 aaKnown RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 ZNF720Q7Z2F6 126 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 HACE1Q8IYU2 909 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 TMEM105Q8N8V8 129 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 TMEM161BQ8NDZ6 487 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 SPPL3Q8TCT6 385 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 P2RX5Q93086 422 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 BICD1Q96G01 975 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 ADPGKQ9BRR6 497 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 TRIM6Q9C030 488 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 ST6GALNAC4Q9H4F1 302 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 MINDY3Q9H8M7 445 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 AGPAT5Q9NUQ2 364 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 TBC1D7Q9P0N9 293 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
RPAIN-204ENST00000405578 MYH9P35579 1960 aaKnown RBP11.56□□□□□ -0.56
RPAIN-204ENST00000405578 NCOR2Q9Y618 2525 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 EP300Q09472 2414 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-204ENST00000405578 HNRNPDLO14979 420 aaKnown RBP11.55□□□□□ -0.56
RPAIN-204ENST00000405578 N4BP3O15049 544 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 TSPAN1O60635 241 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 FGFR4P22455 802 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 CASP1P29466 404 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 RAB27AP51159 221 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 GTF2BQ00403 316 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 DPYDQ12882 1025 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 PNOCQ13519 176 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 KCNB1Q14721 858 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 SLC24A5Q71RS6 500 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 SYCP3Q8IZU3 236 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 KLHL23Q8NBE8 558 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 POF1BQ8WVV4 589 aa11.55□□□□□ -0.56
RPAIN-204ENST00000405578 SUSD6Q92537 303 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms