RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 IPPQ9Y573 584 aa17.15■□□□□ 0.34
CDPF1-204ENST00000404744 SCN5AQ14524 2016 aa17.15■□□□□ 0.34
CDPF1-204ENST00000404744 ZNF623O75123 536 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 BAIAP3O94812 1187 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 GNA14O95837 355 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 CLTAP09496 248 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 SNRNP35Q16560 246 aaKnown RBP17.14■□□□□ 0.33
CDPF1-204ENST00000404744 ECHDC2Q86YB7 292 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 FAM186BQ8IYM0 893 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 FAM212AQ96EL1 285 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 MED15Q96RN5 788 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 MKNK1Q9BUB5 465 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 THAP9Q9H5L6 903 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 TOPORSQ9NS56 1045 aaPredicted RBP17.14■□□□□ 0.33
CDPF1-204ENST00000404744 SNTG2Q9NY99 539 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 PCDH10Q9P2E7 1040 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
CDPF1-204ENST00000404744 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 C9IYK1 514 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 RBAK-RBAKDNI3L0D1 243 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 SLC16A3O15427 465 aaKnown RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 EOMESO95936 686 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 KRT13P13646 458 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 KCNJ6P48051 423 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 TCTN1Q2MV58 587 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 ZNF365Q70YC5 407 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 OTOP2Q7RTS6 562 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 DHX40Q8IX18 779 aaKnown RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 ZC3H3Q8IXZ2 948 aaKnown RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 CEP120Q8N960 986 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 MTIF3Q9H2K0 278 aaKnown RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 NXF3Q9H4D5 531 aaKnown RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 UBN1Q9NPG3 1134 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 RBAKQ9NYW8 714 aaPredicted RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 CPSF3Q9UKF6 684 aaKnown RBP17.13■□□□□ 0.33
CDPF1-204ENST00000404744 HES2Q9Y543 173 aa17.13■□□□□ 0.33
CDPF1-204ENST00000404744 AKAP3O75969 853 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 AMHP03971 560 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 TNFSF9P41273 254 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 CASP4P49662 377 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 FAM189BP81408 668 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 IQCB1Q15051 598 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 LRRC55Q6ZSA7 311 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 MRPL10Q7Z7H8 261 aaKnown RBP17.12■□□□□ 0.33
CDPF1-204ENST00000404744 USP37Q86T82 979 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 LUZP1Q86V48 1076 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 CBWD2Q8IUF1 395 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 SMG8Q8ND04 991 aaKnown RBP17.12■□□□□ 0.33
CDPF1-204ENST00000404744 RNF214Q8ND24 703 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 ZSWIM2Q8NEG5 633 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 ANKRD20A12PQ8NF67 263 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 LINC01599Q8WXQ3 324 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 ELAC1Q9H777 363 aaKnown RBP17.12■□□□□ 0.33
CDPF1-204ENST00000404744 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
CDPF1-204ENST00000404744 FANCLQ9NW38 375 aa17.12■□□□□ 0.33
CDPF1-204ENST00000404744 MAPK13O15264 365 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 AKAP5P24588 427 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 POU5F1Q01860 360 aaKnown RBP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 PPP2R3AQ06190 1150 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 SURF1Q15526 300 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 CRELD2Q6UXH1 353 aaPredicted RBP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 INTS8Q75QN2 995 aaKnown RBP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 VWCEQ96DN2 955 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 FNBP1Q96RU3 617 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 SAMSN1Q9NSI8 373 aaKnown RBP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 ARMCX3Q9UH62 379 aaPredicted RBP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 GIT1Q9Y2X7 761 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 FAM189A1O60320 539 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 RECQL4O94761 1208 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 IL18RAPO95256 599 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 CXCL8P10145 99 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 NCAPHQ15003 741 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 C16orf59Q7L2K0 433 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 FRMD5Q7Z6J6 570 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 NPAS4Q8IUM7 802 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 BRSK2Q8IWQ3 736 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 CD302Q8IX05 232 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 TMEM192Q8IY95 271 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 LPPQ93052 612 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 CNOT6LQ96LI5 555 aaKnown RBP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 RPS6KC1Q96S38 1066 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDPF1-204ENST00000404744 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 PLEKHA5Q9HAU0 1116 aa17.11■□□□□ 0.33
CDPF1-204ENST00000404744 HOXA2O43364 376 aa17.1■□□□□ 0.33
CDPF1-204ENST00000404744 UPP2O95045 317 aa17.1■□□□□ 0.33
CDPF1-204ENST00000404744 TPM2P07951 284 aa17.1■□□□□ 0.33
CDPF1-204ENST00000404744 MAGEA10P43363 369 aaPredicted RBP17.1■□□□□ 0.33
CDPF1-204ENST00000404744 MTIF2P46199 727 aaKnown RBP17.1■□□□□ 0.33
CDPF1-204ENST00000404744 EPHB4P54760 987 aa17.1■□□□□ 0.33
CDPF1-204ENST00000404744 SPAG1Q07617 926 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms