RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZBTB10Q96DT7 871 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 PRIMPOLQ96LW4 560 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 ACO2Q99798 780 aaKnown RBP22.8■■□□□ 1.24
TPM1-208ENST00000404484 AGPAT5Q9NUQ2 364 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 ANKFY1Q9P2R3 1169 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 RNF225M0QZC1 329 aaPredicted RBP22.8■■□□□ 1.24
TPM1-208ENST00000404484 CD4P01730 458 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 PON1P27169 355 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 MBTD1Q05BQ5 628 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 PRPF4BQ13523 1007 aaKnown RBP22.8■■□□□ 1.24
TPM1-208ENST00000404484 TSHZ1Q6ZSZ6 1077 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 KIAA0319LQ8IZA0 1049 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 SCLT1Q96NL6 688 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 FAM213AQ9BRX8 229 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 SEZ6LQ9BYH1 1024 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 FBXL5Q9UKA1 691 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 SCN10AQ9Y5Y9 1956 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 KIAA0355O15063 1070 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 MEA1Q16626 185 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 TMEM132AQ24JP5 1023 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 SRGAP1Q7Z6B7 1085 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 C7orf31Q8N865 590 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 PARD3BQ8TEW8 1205 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 NLRP7Q8WX94 980 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 TRPV6Q9H1D0 765 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 IFT122Q9HBG6 1241 aa22.79■■□□□ 1.24
TPM1-208ENST00000404484 A0A087WZ62 844 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 C17orf102A2RUQ5 167 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 VTNP04004 478 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 CYP2C9P11712 490 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 HNRNPH3P31942 346 aaKnown RBP22.78■■□□□ 1.24
TPM1-208ENST00000404484 GPC3P51654 580 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 CDK17Q00537 523 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 MPZL3Q6UWV2 235 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 ZSWIM2Q8NEG5 633 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 SYN2Q92777 582 aaPredicted RBP22.78■■□□□ 1.24
TPM1-208ENST00000404484 FDXACB1Q9BRP7 624 aaPredicted RBP22.78■■□□□ 1.24
TPM1-208ENST00000404484 TCHPQ9BT92 498 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 GANQ9H2C0 597 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 RRAGDQ9NQL2 400 aaPredicted RBP22.78■■□□□ 1.24
TPM1-208ENST00000404484 TBX21Q9UL17 535 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 MYO6Q9UM54 1294 aa22.78■■□□□ 1.24
TPM1-208ENST00000404484 EPHB6O15197 1021 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 B4GALT4O60513 344 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 NOL4O94818 638 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 RFX1P22670 979 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 CLCN1P35523 988 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 MXI1P50539 228 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 POLR2FP61218 127 aaKnown RBP22.77■■□□□ 1.24
TPM1-208ENST00000404484 ADAM17P78536 824 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 MCL1Q07820 350 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 PSMD6Q15008 389 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 CBWD6Q4V339 395 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 CBWD3Q5JTY5 395 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 CBWD5Q5RIA9 395 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 ATF7IP2Q5U623 682 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 KLHDC7AQ5VTJ3 777 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 PDXDC1Q6P996 788 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 LBHD1Q9BQE6 289 aaPredicted RBP22.77■■□□□ 1.24
TPM1-208ENST00000404484 PLAGL2Q9UPG8 496 aa22.77■■□□□ 1.24
TPM1-208ENST00000404484 OGTO15294 1046 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 TLR3O15455 904 aaKnown RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 ZSCAN12O43309 604 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 EDN1P05305 212 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 SLC9A1P19634 815 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 HOXC8P31273 242 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 BMP8BP34820 402 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 NLRP11P59045 1033 aaKnown RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 PCBP1Q15365 356 aaKnown RBP eCLIP22.76■■□□□ 1.23
TPM1-208ENST00000404484 RRAGAQ7L523 313 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 CCAR2Q8N163 923 aaKnown RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 BAP1Q92560 729 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 BADQ92934 168 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 CCDC127Q96BQ5 260 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 ZBTB45Q96K62 511 aaPredicted RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 FNBP1Q96RU3 617 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 TMEM8AQ9HCN3 771 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 TRMT13Q9NUP7 481 aaKnown RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 TNFSF13BQ9Y275 285 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 CNTNAP2Q9UHC6 1331 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 UCHL3P15374 230 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 RAG1P15918 1043 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 PROZP22891 400 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 DLG4P78352 724 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 FAM47CQ5HY64 1035 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 C1orf220Q5T0J3 134 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 KRT39Q6A163 491 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 TRIM65Q6PJ69 517 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 FMNL3Q8IVF7 1028 aa22.76■■□□□ 1.23
TPM1-208ENST00000404484 C17orf53Q8N3J3 647 aaPredicted RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 GCOM2Q9BZD3 368 aaPredicted RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 INTS2Q9H0H0 1204 aaKnown RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 RBAKQ9NYW8 714 aaPredicted RBP22.76■■□□□ 1.23
TPM1-208ENST00000404484 SOWAHDA6NJG2 315 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 LRRIQ3A6PVS8 624 aaPredicted RBP22.75■■□□□ 1.23
TPM1-208ENST00000404484 GCLMP48507 274 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 PPP3CAQ08209 521 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 ZNF568Q3ZCX4 644 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 HABP4Q5JVS0 413 aaKnown RBP22.75■■□□□ 1.23
TPM1-208ENST00000404484 E4F1Q66K89 784 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms