RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ART4Q93070 314 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 PI4K2AQ9BTU6 479 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 PARVGQ9HBI0 331 aa10.23□□□□□ -0.77
SMC1B-202ENST00000404354 WRAP73Q9P2S5 460 aaPredicted RBP10.23□□□□□ -0.77
SMC1B-202ENST00000404354 PI4K2BG5E9Z4 385 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 KRT5P13647 590 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 WDR4P57081 412 aaKnown RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ZYXQ15942 572 aaKnown RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 SYCP2LQ5T4T6 812 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 PPP1R18Q6NYC8 613 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 UCMAQ8WVF2 138 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ACSF2Q96CM8 615 aaPredicted RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 PITPNM2Q9BZ72 1349 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ANAPC7Q9UJX3 599 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ANKRD36CQ5JPF3 1778 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ZMYM2Q9UBW7 1377 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 C2orf71A6NGG8 1288 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 TAC1P20366 129 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 POLE2P56282 527 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 GRIK3Q13003 919 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 SETDB1Q15047 1291 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 HYIQ5T013 277 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 RNF220Q5VTB9 566 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 RFWD3Q6PCD5 774 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 SLFN12Q8IYM2 578 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 CCHCR1Q8TD31 782 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 TBC1D22AQ8WUA7 517 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 LRRC37BQ96QE4 947 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 RPS6KC1Q96S38 1066 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 TOPORSQ9NS56 1045 aaPredicted RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 NINJ2Q9NZG7 142 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 DLGAP2Q9P1A6 1054 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 CNOT7Q9UIV1 285 aaKnown RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ATF5Q9Y2D1 282 aaPredicted RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 USP20Q9Y2K6 914 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 SHANK3Q9BYB0 1731 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 DCCP43146 1447 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 NCANO14594 1321 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 K7ENM7 598 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 TP73O15350 636 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 TTC4O95801 387 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 BMP3P12645 472 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ETS1P14921 441 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ATP4AP20648 1035 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 RRM1P23921 792 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 RFC5P40937 340 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ORC2Q13416 577 aaPredicted RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 FASTKD3Q14CZ7 662 aaKnown RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 CCDC6Q16204 474 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ANO7Q6IWH7 933 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 CCDC174Q6PII3 467 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 PASD1Q8IV76 773 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 FAM13CQ8NE31 585 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 BORCS6Q96GS4 357 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 DDX50Q9BQ39 737 aaKnown RBP10.22□□□□□ -0.77
SMC1B-202ENST00000404354 SYT15Q9BQS2 421 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 TBC1D10AQ9BXI6 508 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 C10orf88Q9H8K7 445 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 NPHS2Q9NP85 383 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 PARP2Q9UGN5 583 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 PCYOX1Q9UHG3 505 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 CHKBQ9Y259 395 aa10.22□□□□□ -0.77
SMC1B-202ENST00000404354 ROBO3Q96MS0 1386 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 UNC5CO95185 931 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 BCRP11274 1271 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 GNAT1P11488 350 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 ATF2P15336 505 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 CTNNA2P26232 953 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 RWDD2BP57060 319 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 BFSP1Q12934 665 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 FAM98CQ17RN3 349 aaKnown RBP10.21□□□□□ -0.77
SMC1B-202ENST00000404354 LMBRD2Q68DH5 695 aaPredicted RBP10.21□□□□□ -0.77
SMC1B-202ENST00000404354 TMEM154Q6P9G4 183 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 RHOT2Q8IXI1 618 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 LENG9Q96B70 501 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 RUNDC3BQ96NL0 473 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 PHTF1Q9UMS5 762 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 SLITRK3O94933 977 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 OAS1P00973 400 aaKnown RBP10.21□□□□□ -0.77
SMC1B-202ENST00000404354 CD58P19256 250 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 CA4P22748 312 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 SHMT1P34896 483 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 CPA2P48052 419 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 MUM1Q2TAK8 710 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 AP1ARQ63HQ0 302 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 ZC3H3Q8IXZ2 948 aaKnown RBP10.21□□□□□ -0.77
SMC1B-202ENST00000404354 GLIS1Q8NBF1 620 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.77
SMC1B-202ENST00000404354 NYXQ9GZU5 481 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 VPS37BQ9H9H4 285 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 UBN1Q9NPG3 1134 aa10.21□□□□□ -0.77
SMC1B-202ENST00000404354 IFNB1P01574 187 aa10.21□□□□□ -0.78
SMC1B-202ENST00000404354 IRX1P78414 480 aaPredicted RBP10.21□□□□□ -0.78
SMC1B-202ENST00000404354 BLMHQ13867 455 aa10.21□□□□□ -0.78
SMC1B-202ENST00000404354 PKN2Q16513 984 aaKnown RBP10.21□□□□□ -0.78
SMC1B-202ENST00000404354 ATP13A4Q4VNC1 1196 aa10.21□□□□□ -0.78
SMC1B-202ENST00000404354 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.78
SMC1B-202ENST00000404354 KIFC3Q9BVG8 833 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms