RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CASKIN2Q8WXE0 1202 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 IFT81Q8WYA0 676 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 LENG1Q96BZ8 264 aaPredicted RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 BORCS6Q96GS4 357 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ZIM3Q96PE6 472 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MSCO60682 206 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 H2AFZP0C0S5 128 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PSMC2P35998 433 aaKnown RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CASP4P49662 377 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NPEPPSP55786 919 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GJA9P57773 515 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TTMPQ5BVD1 217 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 H2AFVQ71UI9 128 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SYCE1Q8N0S2 351 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TPCN2Q8NHX9 752 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TGFB1I1O43294 461 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 RAD51CO43502 376 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 STAT1P42224 750 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 QARSP47897 775 aaKnown RBP17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SLFN11Q7Z7L1 901 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FMNL3Q8IVF7 1028 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CCDC60Q8IWA6 550 aaPredicted RBP17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FAM186BQ8IYM0 893 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 C1orf131Q8NDD1 294 aaKnown RBP17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FAM107BQ9H098 131 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 UPF3AQ9H1J1 476 aaKnown RBP17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 DAAM1Q9Y4D1 1078 aa17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 MAFBQ9Y5Q3 323 aaPredicted RBP17.2■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PGRMC1O00264 195 aaKnown RBP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 EIF3HO15372 352 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 LGR5O75473 907 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 LYPLA2O95372 231 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 MMP3P08254 477 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FAM153BP0C7A2 387 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CPT1AP50416 773 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PSMC5P62195 406 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CUL1Q13616 776 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CTTNQ14247 550 aaKnown RBP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FAM153CQ494X1 144 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 STXBP4Q6ZWJ1 553 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 C1orf186Q6ZWK4 172 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 TPH2Q8IWU9 490 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 BANK1Q8NDB2 785 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ARL8AQ96BM9 186 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PCYT2Q99447 389 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 LXNQ9BS40 222 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SUCLA2Q9P2R7 463 aaPredicted RBP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 GABBR1Q9UBS5 961 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FAM153AQ9UHL3 310 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PCDHB13Q9Y5F0 798 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZMYM2Q9UBW7 1377 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 EMSYQ7Z589 1322 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ESYT3A0FGR9 886 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZSCAN5CA6NGD5 496 aaPredicted RBP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CLIC2O15247 247 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CEP104O60308 925 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 GNGT1P63211 74 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 DGKDQ16760 1214 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 BRDTQ58F21 947 aaPredicted RBP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 LHX8Q68G74 356 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 C4orf19Q8IY42 314 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 C10orf67Q8IYJ2 551 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ATP6V0A1Q93050 837 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ISCUQ9H1K1 167 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PARVGQ9HBI0 331 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 SPC25Q9HBM1 224 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 ZNF302Q9NR11 478 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 WRAP73Q9P2S5 460 aaPredicted RBP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 AJAP1Q9UKB5 411 aaPredicted RBP17.19■□□□□ 0.34
CHRFAM7A-203ENST00000401522 IGSF9BQ9UPX0 1349 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CCDC188H7C350 402 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 BACH1O14867 736 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 DKC1O60832 514 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 HSPA9P38646 679 aaKnown RBP17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 STAT5BP51692 787 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 CORO7P57737 925 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 RNASE9P60153 205 aaKnown RBP17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 FSCN1Q16658 493 aaKnown RBP17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 UGCGQ16739 394 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PLPPR4Q7Z2D5 763 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PEX26Q7Z412 305 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 KLHL7Q8IXQ5 586 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 AZI2Q9H6S1 392 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 XPNPEP3Q9NQH7 507 aa17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 PAK6Q9NQU5 681 aaPredicted RBP17.18■□□□□ 0.34
CHRFAM7A-203ENST00000401522 STXBP5LQ9Y2K9 1186 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms