RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 DUSP2Q05923 314 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 FOXL1Q12952 345 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 MFSD5Q6N075 450 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 SGMS1Q86VZ5 419 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 LYSMD2Q8IV50 215 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 CMTM4Q8IZR5 234 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 ANKRD35Q8N283 1001 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 LMBR1Q8WVP7 490 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 EDAQ92838 391 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 LRRC59Q96AG4 307 aaKnown RBP4.77□□□□□ -1.65
RPA3-203ENST00000401447 WWC2-AS2Q96NR7 200 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 PUS7LQ9H0K6 701 aaKnown RBP4.77□□□□□ -1.65
RPA3-203ENST00000401447 AGO3Q9H9G7 860 aaKnown RBP4.77□□□□□ -1.65
RPA3-203ENST00000401447 VTA1Q9NP79 307 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 TLR9Q9NR96 1032 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 ING3Q9NXR8 418 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 SLC5A4Q9NY91 659 aa4.77□□□□□ -1.65
RPA3-203ENST00000401447 UTRNP46939 3433 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 A0A1W2PR48 441 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 IPO13O94829 963 aaKnown RBP4.76□□□□□ -1.65
RPA3-203ENST00000401447 LTA4HP09960 611 aaKnown RBP4.76□□□□□ -1.65
RPA3-203ENST00000401447 GYPEP15421 78 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 GNAT2P19087 354 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 CLIP1P30622 1438 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 SLC5A3P53794 718 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 CDK17Q00537 523 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 TROQ12816 1431 aaPredicted RBP4.76□□□□□ -1.65
RPA3-203ENST00000401447 CRHR2Q13324 411 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 DIP2AQ14689 1571 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 ELAVL1Q15717 326 aaKnown RBP4.76□□□□□ -1.65
RPA3-203ENST00000401447 FKBP15Q5T1M5 1219 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 GJC2Q5T442 439 aaPredicted RBP4.76□□□□□ -1.65
RPA3-203ENST00000401447 FAM111BQ6SJ93 734 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 TAS1R1Q7RTX1 841 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 SLC41A1Q8IVJ1 513 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 ZNF808Q8N4W9 903 aaPredicted RBP4.76□□□□□ -1.65
RPA3-203ENST00000401447 CNTD1Q8N815 330 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 OR5M3Q8NGP4 307 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 SETD5Q9C0A6 1442 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 PRDM12Q9H4Q4 367 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 CCM2LQ9NUG4 571 aaPredicted RBP4.76□□□□□ -1.65
RPA3-203ENST00000401447 DNAJC28Q9NX36 388 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 COL4A3BPQ9Y5P4 624 aa4.76□□□□□ -1.65
RPA3-203ENST00000401447 ARHGAP23Q9P227 1491 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 CDC42BPBQ9Y5S2 1711 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 ATRNO75882 1429 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 NCOA3Q9Y6Q9 1424 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 K7ESF4 209 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 CDK11BP21127 795 aaKnown RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 IBSPP21815 317 aaPredicted RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 HIBADHP31937 336 aaKnown RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 ERVK-21P61565 698 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 CCT2P78371 535 aaKnown RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 SRSF2Q01130 221 aaKnown RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 KLF1Q13351 362 aaPredicted RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 R3HDM1Q15032 1099 aaKnown RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 MUM1Q2TAK8 710 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 TOR2AQ5JU69 321 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 SPDYAQ5MJ70 313 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 FAM180AQ6UWF9 173 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 MAMDC4Q6UXC1 1216 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 CMIPQ8IY22 773 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 GLB1L3Q8NCI6 653 aaPredicted RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 SH3RF3Q8TEJ3 882 aaPredicted RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 ZNF480Q8WV37 535 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 ORAI2Q96SN7 254 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 MENTQ9BUN1 341 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 ACE2Q9BYF1 805 aaPredicted RBP4.75□□□□□ -1.65
RPA3-203ENST00000401447 IFT122Q9HBG6 1241 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 GIT1Q9Y2X7 761 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 SH3BP1Q9Y3L3 701 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 TESMINQ9Y4I5 508 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 SLIT1O75093 1534 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 NCOA2Q15596 1464 aa4.75□□□□□ -1.65
RPA3-203ENST00000401447 ANKRD62A6NC57 917 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 ALG1L2C9J202 215 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 C1QTNF3-AMACRE9PGA6 284 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 TMEM127O75204 238 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 ATF3P18847 181 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 ACRV1P26436 265 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 CDKN1CP49918 316 aaPredicted RBP4.74□□□□□ -1.65
RPA3-203ENST00000401447 GUCY2FP51841 1108 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 AMPD3Q01432 767 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 CLUL1Q15846 466 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 MBNL2Q5VZF2 373 aaKnown RBP4.74□□□□□ -1.65
RPA3-203ENST00000401447 MSL3Q8N5Y2 521 aaKnown RBP4.74□□□□□ -1.65
RPA3-203ENST00000401447 MB21D1Q8N884 522 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 TSPEARQ8WU66 669 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 MIEF2Q96C03 454 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 MTMR8Q96EF0 704 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 IL17RAQ96F46 866 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 ZNF512Q96ME7 567 aaPredicted RBP4.74□□□□□ -1.65
RPA3-203ENST00000401447 CDC5LQ99459 802 aaKnown RBP4.74□□□□□ -1.65
RPA3-203ENST00000401447 AURKAIP1Q9NWT8 199 aaPredicted RBP4.74□□□□□ -1.65
RPA3-203ENST00000401447 MYRFQ9Y2G1 1151 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 NINLQ9Y2I6 1382 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 UNC13BO14795 1591 aa4.74□□□□□ -1.65
RPA3-203ENST00000401447 KDM5AP29375 1690 aaKnown RBP4.73□□□□□ -1.65
RPA3-203ENST00000401447 RTEL1-TNFRSF6BF6WH68 1400 aa4.73□□□□□ -1.65
RPA3-203ENST00000401447 PREX2Q70Z35 1606 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms