RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 SPIRE2Q8WWL2 714 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 CDK5RAP3Q96JB5 506 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 RPS6KC1Q96S38 1066 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 GPR62Q9BZJ7 368 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 ADAM7Q9H2U9 754 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 MRPL17Q9NRX2 175 aaKnown RBP17.44■□□□□ 0.38
ATG4B-203ENST00000400772 CHST7Q9NS84 486 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 KCND2Q9NZV8 630 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 MTMR6Q9Y217 621 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 GDAQ9Y2T3 454 aa17.44■□□□□ 0.38
ATG4B-203ENST00000400772 RBM19Q9Y4C8 960 aaKnown RBP17.44■□□□□ 0.38
ATG4B-203ENST00000400772 C2CD2LO14523 706 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 GPR37L1O60883 481 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 NR1I2O75469 434 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 CLCN4P51793 760 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 DSG1Q02413 1049 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-203ENST00000400772 TUSC3Q13454 348 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 KARSQ15046 597 aaKnown RBP17.43■□□□□ 0.38
ATG4B-203ENST00000400772 RNF135Q8IUD6 432 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 TMEM87AQ8NBN3 555 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 TMEM161BQ8NDZ6 487 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 B3GALT6Q96L58 329 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 LRFN3Q9BTN0 628 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
ATG4B-203ENST00000400772 MRPL4Q9BYD3 311 aaKnown RBP17.43■□□□□ 0.38
ATG4B-203ENST00000400772 CDT1Q9H211 546 aa17.43■□□□□ 0.38
ATG4B-203ENST00000400772 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 CASTOR2A6NHX0 329 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 DCXO43602 365 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 URODP06132 367 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 THP07101 528 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 ALADP13716 330 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 PROZP22891 400 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 KLRC2P26717 231 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-203ENST00000400772 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 SPECC1Q5M775 1068 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 FUT10Q6P4F1 479 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 USP49Q70CQ1 688 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 PPFIBP1Q86W92 1011 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 CEP120Q8N960 986 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 SNX21Q969T3 373 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 ZBTB45Q96K62 511 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-203ENST00000400772 RPGRIP1Q96KN7 1286 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 EMILIN2Q9BXX0 1053 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 RXFP1Q9HBX9 757 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 DAXXQ9UER7 740 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-203ENST00000400772 MUTYHQ9UIF7 546 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 ADAM28Q9UKQ2 775 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
ATG4B-203ENST00000400772 TEX28O15482 410 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 WEE2P0C1S8 567 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 MAPTP10636 758 aaKnown RBP17.41■□□□□ 0.38
ATG4B-203ENST00000400772 PLCG1P19174 1290 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 COL9A1P20849 921 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 IGFBP6P24592 240 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-203ENST00000400772 MARCKSP29966 332 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-203ENST00000400772 GLUD2P49448 558 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 ITIH3Q06033 890 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 MCM6Q14566 821 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 TMEM31Q5JXX7 168 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 RARS2Q5T160 578 aaKnown RBP17.41■□□□□ 0.38
ATG4B-203ENST00000400772 ALKAL1Q6UXT8 129 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 RAD54LQ92698 747 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 EPSTI1Q96J88 318 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 PPP1R10Q96QC0 940 aaKnown RBP17.41■□□□□ 0.38
ATG4B-203ENST00000400772 CCSER1Q9C0I3 900 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 DZANK1Q9NVP4 752 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 RAPGEFL1Q9UHV5 662 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 FBXO2Q9UK22 296 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-203ENST00000400772 SSX2IPQ9Y2D8 614 aa17.41■□□□□ 0.38
ATG4B-203ENST00000400772 MEFVO15553 781 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-203ENST00000400772 STX6O43752 255 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 TADA2AO75478 443 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 KIF4AO95239 1232 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 BRD1O95696 1058 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 GRM5P41594 1212 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 DHX8Q14562 1220 aaKnown RBP17.4■□□□□ 0.38
ATG4B-203ENST00000400772 ZNF568Q3ZCX4 644 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 XKR4Q5GH76 650 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 HERC4Q5GLZ8 1057 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-203ENST00000400772 GLRA4Q5JXX5 417 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 ZBTB33Q86T24 672 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 GPBP1Q86WP2 473 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 HASPINQ8TF76 798 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 KCNN1Q92952 543 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 FBXL18Q96ME1 805 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 CLIC6Q96NY7 704 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 REEP2Q9BRK0 252 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 POMKQ9H5K3 350 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 KCNG1Q9UIX4 513 aa17.4■□□□□ 0.38
ATG4B-203ENST00000400772 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
ATG4B-203ENST00000400772 SMIM28A0A1B0GU29 152 aa17.39■□□□□ 0.37
ATG4B-203ENST00000400772 MCF2P10911 925 aa17.39■□□□□ 0.37
ATG4B-203ENST00000400772 DDIT3P35638 169 aa17.39■□□□□ 0.37
ATG4B-203ENST00000400772 ZNF131P52739 623 aa17.39■□□□□ 0.37
ATG4B-203ENST00000400772 SMTNP53814 917 aa17.39■□□□□ 0.37
ATG4B-203ENST00000400772 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms