RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 SPATA2LQ8IUW3 424 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 CLEC4FQ8N1N0 589 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 SLC13A1Q9BZW2 595 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 UNC45AQ9H3U1 944 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 TMEM39AQ9NV64 488 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 THOC2Q8NI27 1593 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 PRPSAP2O60256 369 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 EPHX2P34913 555 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 IL31Q6EBC2 164 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 NSUN6Q8TEA1 469 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 FAM227BQ96M60 508 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 OLFM1Q99784 485 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 HDHD2Q9H0R4 259 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 EVA1BQ9NVM1 165 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 PCDHB8Q9UN66 801 aa11.76□□□□□ -0.53
CACNA1C-217ENST00000399641 USP19O94966 1318 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 TNKSO95271 1327 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 AP3B1O00203 1094 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 CLIC2O15247 247 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 TRIM3O75382 744 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PDE9AO76083 593 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 SERPINB10P48595 397 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ALDH7A1P49419 539 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 NUMBP49757 651 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 SGO1Q5FBB7 561 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 IER5Q5VY09 327 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 EFHBQ8N7U6 833 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 COG1Q8WTW3 980 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 GTF3C2Q8WUA4 911 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ACAD9Q9H845 621 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ZNF556Q9HAH1 456 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ZFP69BQ9UJL9 534 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PIPSLA2A3N6 862 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 CCDC78A2IDD5 438 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 SLC27A2O14975 620 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 MOCS2O96007 188 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 RGS2P41220 211 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PHKG1Q16816 387 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 GALNT4Q8N4A0 578 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ZNF668Q96K58 619 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 DFFAO00273 331 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PYGMP11217 842 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 LLGL2Q6P1M3 1020 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 THAP11Q96EK4 314 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 ALG13Q9NP73 1137 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 DCDC2Q9UHG0 476 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PIN4Q9Y237 131 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 FTCDO95954 541 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 STAT3P40763 770 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PAN2Q504Q3 1202 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 GNASQ5JWF2 1037 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 CEP68Q76N32 757 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 SRRM1Q8IYB3 904 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 OR8H2Q8N162 312 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 MAGED4Q96JG8 741 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 SEPT5Q99719 369 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 RSPH9Q9H1X1 276 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 UGGT1Q9NYU2 1555 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PTPN1P18031 435 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 NME3Q13232 169 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 GALNT17Q6IS24 598 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 SNX31Q8N9S9 440 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 JADE3Q92613 823 aa11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 GBA2Q9HCG7 927 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-217ENST00000399641 TXNP10599 105 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 PHKA1P46020 1223 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 MTMR1Q13613 665 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 TMEM132BQ14DG7 1078 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 SKA1Q96BD8 255 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 TMA16Q96EY4 203 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 KDM4CQ9H3R0 1056 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 ARMCX3Q9UH62 379 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 PCDHGB4Q9UN71 923 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 APOBEC2Q9Y235 224 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 TBC1D4O60343 1298 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 COPS2P61201 443 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 AMPD2Q01433 879 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 MAPK6Q16659 721 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 ICE2Q659A1 982 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 BTBD6Q96KE9 485 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 NSMCE4AQ9NXX6 385 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 GGT7Q9UJ14 662 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 LRCH1Q9Y2L9 728 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 ITSN2Q9NZM3 1697 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 AP1B1Q10567 949 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 CYP4A22Q5TCH4 519 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 KRT78Q8N1N4 520 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 SAAL1Q96ER3 474 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 TINF2Q9BSI4 451 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 NFE2L3Q9Y4A8 694 aa11.74□□□□□ -0.53
CACNA1C-217ENST00000399641 CUTAO60888 179 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms