RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 DIS3Q9Y2L1 958 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 COPEO14579 308 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 ZKSCAN8Q15776 578 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 KHDRBS2Q5VWX1 349 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 SCYL3Q8IZE3 742 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 SLC35F6Q8N357 371 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 SCFD2Q8WU76 684 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 FAM151AQ8WW52 585 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 CAPS2Q9BXY5 557 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 NFKBIZQ9BYH8 718 aa12.78□□□□□ -0.36
CACNA1C-213ENST00000399629 FAM47DPA6NHR8 397 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 ZSCAN9O15535 394 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 PCSK1P29120 753 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 SLCO1A2P46721 670 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 USP11P51784 963 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 TAP1Q03518 808 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 TWF1Q12792 350 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 LMBRD1Q9NUN5 540 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 PRG3Q9Y2Y8 225 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 TRIM17Q9Y577 477 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 ATP1A1P05023 1023 aaKnown RBP12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 RFC5P40937 340 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 PDCLQ13371 301 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 CDH18Q13634 790 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-213ENST00000399629 PSMD3O43242 534 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 KCNA2P16389 499 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 TRIM72Q6ZMU5 477 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 BARHL2Q9NY43 387 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 ABI2Q9NYB9 513 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 DAGLAQ9Y4D2 1042 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 TLR2O60603 784 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 AARS2Q5JTZ9 985 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 ENOSF1Q7L5Y1 443 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 TBC1D10CQ8IV04 446 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 DDIASQ8IXT1 998 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 SNX31Q8N9S9 440 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 ZFP42Q96MM3 310 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 GIMAP4Q9NUV9 329 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 SLC30A1Q9Y6M5 507 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 NDUFB5O43674 189 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 TGFB2P61812 414 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 KRT72Q14CN4 511 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.37
CACNA1C-213ENST00000399629 ZW10O43264 779 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 EGFRP00533 1210 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 BCAR1P56945 870 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 SLC7A14Q8TBB6 771 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 MAGEB10Q96LZ2 347 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 LRRC53A6NM62 1247 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 ATP9BO43861 1147 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 HBP1O60381 514 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 IL18RAPO95256 599 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 MBL2P11226 248 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 PID1Q7Z2X4 250 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 CCNYL1Q8N7R7 359 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 PARVAQ9NVD7 372 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 SUPT3HB4E1H0 165 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 FAM47E-STBD1D6RA91 191 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 ZBED6P86452 979 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 ANKS6Q68DC2 871 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 ENAHQ8N8S7 591 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 CSGALNACT1Q8TDX6 532 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 MRPS31Q92665 395 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 THG1LQ9NWX6 298 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 C5orf58C9J3I9 102 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 CENPAP49450 140 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 EMC2Q15006 297 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 CYB5R4Q7L1T6 521 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 C11orf96Q7Z7L8 435 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 ZNF564Q8TBZ8 553 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 RNF25Q96BH1 459 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 DPYDQ12882 1025 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 MMS22LQ6ZRQ5 1243 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 USP33Q8TEY7 942 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 RAD18Q9NS91 495 aa12.76□□□□□ -0.37
CACNA1C-213ENST00000399629 KRT38O76015 456 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 AMHP03971 560 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 HMOX2P30519 316 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 STILQ15468 1287 aa12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 LMBRD2Q68DH5 695 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 ALKBH5Q6P6C2 394 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-213ENST00000399629 PROM2Q8N271 834 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms