RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 COMTP21964 271 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 HSD17B3P37058 310 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 DR1Q01658 176 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 SP2Q02086 613 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 KCTD16Q68DU8 428 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 LRIG3Q6UXM1 1119 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 CYFIP1Q7L576 1253 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 ADAT2Q7Z6V5 191 aaKnown RBP14.88□□□□□ -0.03
PRAME-202ENST00000398743 C1orf131Q8NDD1 294 aaKnown RBP14.88□□□□□ -0.03
PRAME-202ENST00000398743 CHST13Q8NET6 341 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 ZNF564Q8TBZ8 553 aaPredicted RBP14.88□□□□□ -0.03
PRAME-202ENST00000398743 ZNF653Q96CK0 615 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 FAM81BQ96LP2 452 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 ZNF302Q9NR11 478 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 GTF3C4Q9UKN8 822 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 SSC5DA1L4H1 1573 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 A6NNZ2 444 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 EXTL3O43909 919 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 CYP1A2P05177 515 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 HSPA6P17066 643 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 ICAM3P32942 547 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 SKOR1P84550 965 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 STRN3Q13033 797 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 TUBB8Q3ZCM7 444 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 ANKRD35Q8N283 1001 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 DHX38Q92620 1227 aaKnown RBP14.88□□□□□ -0.03
PRAME-202ENST00000398743 KRT35Q92764 455 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 NUP85Q9BW27 656 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 WNT8AQ9H1J5 351 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 ERVK-5Q9HDB9 667 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 C1orf112Q9NSG2 853 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 GPRC5DQ9NZD1 345 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 UVRAGQ9P2Y5 699 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 CHORDC1Q9UHD1 332 aaPredicted RBP14.88□□□□□ -0.03
PRAME-202ENST00000398743 TRPC6Q9Y210 931 aa14.88□□□□□ -0.03
PRAME-202ENST00000398743 MAFBQ9Y5Q3 323 aaPredicted RBP14.88□□□□□ -0.03
PRAME-202ENST00000398743 GOLGA6L10A6NI86 522 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 OATP04181 439 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 KRT5P13647 590 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 SCP2P22307 547 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 IRAK1P51617 712 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 MTMR3Q13615 1198 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 DHX34Q14147 1143 aaKnown RBP14.87□□□□□ -0.03
PRAME-202ENST00000398743 DNAJC21Q5F1R6 531 aaKnown RBP14.87□□□□□ -0.03
PRAME-202ENST00000398743 SH3D19Q5HYK7 790 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 SEL1L2Q5TEA6 688 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 SH2D3CQ8N5H7 860 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.87□□□□□ -0.031e-83■□□□□ 10.3
PRAME-202ENST00000398743 DDX1Q92499 740 aaKnown RBP14.87□□□□□ -0.03
PRAME-202ENST00000398743 TATDN2Q93075 761 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 FNBP1Q96RU3 617 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 DPH5Q9H2P9 285 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRAME-202ENST00000398743 KIAA0391O15091 583 aaKnown RBP14.87□□□□□ -0.03
PRAME-202ENST00000398743 PPFIA4O75335 1185 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 ATG7O95352 703 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 CTNNA1P35221 906 aaKnown RBP14.87□□□□□ -0.03
PRAME-202ENST00000398743 MARCKSL1P49006 195 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 PEX5P50542 639 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 PRKG1Q13976 671 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 CEP85LQ5SZL2 805 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 C15orf39Q6ZRI6 1047 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 TRIM51Q9BSJ1 452 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 PI4K2AQ9BTU6 479 aa14.87□□□□□ -0.03
PRAME-202ENST00000398743 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 HMGB1P1B2RPK0 211 aaPredicted RBP14.86□□□□□ -0.03
PRAME-202ENST00000398743 SPOPO43791 374 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 PHF2O75151 1096 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 GGPS1O95749 300 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 ATP4AP20648 1035 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 COPB2P35606 906 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 GNGT1P63211 74 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 CLDN10P78369 228 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 PSMD6Q15008 389 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 UAP1Q16222 522 aaPredicted RBP14.86□□□□□ -0.03
PRAME-202ENST00000398743 ACAD10Q6JQN1 1059 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 AADACL2Q6P093 401 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 TMC3Q7Z5M5 1100 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 ZNF526Q8TF50 670 aaPredicted RBP14.86□□□□□ -0.03
PRAME-202ENST00000398743 PSPC1Q8WXF1 523 aaKnown RBP14.86□□□□□ -0.03
PRAME-202ENST00000398743 SLC7A3Q8WY07 619 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 KCNN1Q92952 543 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 CD101Q93033 1021 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 TMEM143Q96AN5 459 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 ELMO3Q96BJ8 720 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 ATP6V1G3Q96LB4 118 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 ERP44Q9BS26 406 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 PORCNQ9H237 461 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 DHX33Q9H6R0 707 aaKnown RBP14.86□□□□□ -0.03
PRAME-202ENST00000398743 AGO2Q9UKV8 859 aaKnown RBP14.86□□□□□ -0.03
PRAME-202ENST00000398743 STYXL1Q9Y6J8 313 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 KIAA1217Q5T5P2 1943 aa14.86□□□□□ -0.03
PRAME-202ENST00000398743 EIF3HO15372 352 aaKnown RBP eCLIP14.85□□□□□ -0.03
PRAME-202ENST00000398743 TNNI1P19237 187 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 CHRNA3P32297 505 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 NAMPTP43490 491 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 CNTN2Q02246 1040 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 KCTD19Q17RG1 926 aaPredicted RBP14.85□□□□□ -0.03
PRAME-202ENST00000398743 CLEC16AQ2KHT3 1053 aa14.85□□□□□ -0.03
PRAME-202ENST00000398743 WDR44Q5JSH3 913 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms