RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 COBLL1Q53SF7 1204 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 PRR16Q569H4 304 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 WDR78Q5VTH9 848 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 HHATQ5VTY9 493 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 SNRNP48Q6IEG0 339 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 RASGEF1CQ8N431 466 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 STK32AQ8WU08 396 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 CHURC1Q8WUH1 139 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 RNF25Q96BH1 459 aaPredicted RBP10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 ZIC5Q96T25 663 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 GOLPH3Q9H4A6 298 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 BCAS3Q9H6U6 928 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 TXNRD2Q9NNW7 524 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 CYP39A1Q9NYL5 469 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 CTNNAL1Q9UBT7 734 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 PDLIM1O00151 329 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 FGFR1OPO95684 399 aaKnown RBP10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 OR52E8Q6IFG1 317 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 CNNM4Q6P4Q7 775 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 BTNL9Q6UXG8 535 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 NEK8Q86SG6 692 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 ANKRD13AQ8IZ07 590 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 KIAA0895Q8NCT3 520 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 DYDC1Q8WWB3 177 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 HPS3Q969F9 1004 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 SLC10A4Q96EP9 437 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 TRAPPC9Q96Q05 1148 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 C7orf25Q9BPX7 421 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 CUEDC2Q9H467 287 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 MAGEF1Q9HAY2 307 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 SH3GLB2Q9NR46 395 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 PPP1R9AQ9ULJ8 1098 aa10.86□□□□□ -0.67
HMGCLL1-205ENST00000398661 WDR46O15213 610 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 NOL4O94818 638 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 EIF2AK2P19525 551 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 CROCCP2Q86T23 111 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 LRRC57Q8N9N7 239 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 PIGOQ8TEQ8 1089 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 DNAJC9Q8WXX5 260 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 IFT43Q96FT9 208 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 FGD4Q96M96 766 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 ANO3Q9BYT9 981 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 RANBP17Q9H2T7 1088 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 ETNK1Q9HBU6 452 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 ZDHHC18Q9NUE0 388 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 TMOD4Q9NZQ9 345 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 BTBD7Q9P203 1132 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 PRKAG3Q9UGI9 489 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 FEM1BQ9UK73 627 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 TELO2Q9Y4R8 837 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 PLCG1P19174 1290 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 POU5F1Q01860 360 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 PARP6Q2NL67 630 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 Q3C1V9 767 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 IRGCQ6NXR0 463 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 NCAPG2Q86XI2 1143 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 RBM12BQ8IXT5 1001 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 ASAP3Q8TDY4 903 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 ZC3H15Q8WU90 426 aaKnown RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 MAIP1Q8WWC4 291 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 WDR18Q9BV38 432 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 CCDC113Q9H0I3 377 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 STMN4Q9H169 189 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 CTDP1Q9Y5B0 961 aaPredicted RBP10.85□□□□□ -0.67
HMGCLL1-205ENST00000398661 UNC5CO95185 931 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 CLK2P49760 499 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 POLR2FP61218 127 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 RPS6P62753 249 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 ARID5AQ03989 594 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 KLHL30Q0D2K2 578 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 SLC29A2Q14542 456 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 LRRC14Q15048 493 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 ENOX2Q16206 610 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 TAOK1Q7L7X3 1001 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 EEPD1Q7L9B9 569 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 LONP2Q86WA8 852 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 ZNF513Q8N8E2 541 aaPredicted RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 ENDOVQ8N8Q3 282 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 CLEC4DQ8WXI8 215 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 SH2D3AQ9BRG2 576 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 LSM14BQ9BX40 385 aaKnown RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 CHMP2AO43633 222 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 ITGBL1O95965 494 aaPredicted RBP10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 SMARCA1P28370 1054 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 MAGEA8P43361 318 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 HUNKP57058 714 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 ARHGAP4P98171 946 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 CNTN2Q02246 1040 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 FOXB2Q5VYV0 432 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 DUPD1Q68J44 220 aa10.84□□□□□ -0.67
HMGCLL1-205ENST00000398661 CATSPERGQ6ZRH7 1159 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms