RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 DEPDC1BQ8WUY9 529 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 MS4A14Q96JA4 679 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 ATP6V1G3Q96LB4 118 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 NUF2Q9BZD4 464 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 L2HGDHQ9H9P8 463 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 KLHL8Q9P2G9 620 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 INPP5FQ9Y2H2 1132 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 TXNDC9O14530 226 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 GH1P01241 217 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 PPP2R2AP63151 447 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 RBP5P82980 135 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 TSPY1Q01534 308 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 CCNI2Q6ZMN8 369 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 ANKRD13AQ8IZ07 590 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 TUBB6Q9BUF5 446 aa15.11■□□□□ 0.01
PCDHGA11-201ENST00000398587 SARSP49591 514 aaKnown RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 ERVK-24P63145 666 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 GIT2Q14161 759 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 STILQ15468 1287 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 SNCBQ16143 134 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 MUM1Q2TAK8 710 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 OR6J1Q8NGC5 347 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 ANKRD7Q92527 254 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 AGAP1Q9UPQ3 857 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 RIC1Q4ADV7 1423 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 RSPH10B2B2RC85 870 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 AP5Z1O43299 807 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 RSPH10BP0C881 870 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 PLCB4Q15147 1175 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 KIAA1755Q5JYT7 1200 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 NT5DC1Q5TFE4 455 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 SRRM1Q8IYB3 904 aaKnown RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 GBP7Q8N8V2 638 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 TNIP3Q96KP6 325 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 SEMA6BQ9H3T3 888 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 TXLNGQ9NUQ3 528 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 WDR91A4D1P6 747 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 FOXP2O15409 715 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 EXTL3O43909 919 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 HNRNPH2P55795 449 aaKnown RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 IZUMO3Q5VZ72 239 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 RWDD4Q6NW29 188 aaKnown RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 C15orf52Q6ZUT6 534 aaKnown RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 TRAPPC11Q7Z392 1133 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 NUDCD1Q96RS6 583 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 IDI2Q9BXS1 227 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 PITPNM3Q9BZ71 974 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 MAGED2Q9UNF1 606 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 ANKRD26Q9UPS8 1709 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 ARP10275 920 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 CDH6P55285 790 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 ATG16L1Q676U5 607 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 RAB44Q7Z6P3 723 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 ELAC2Q9BQ52 826 aaKnown RBP15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 PPP1R9AQ9ULJ8 1098 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 TBX20Q9UMR3 447 aa15.1■□□□□ 0.01
PCDHGA11-201ENST00000398587 HBP1O60381 514 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 TOM1L1O75674 476 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 BACE1P56817 501 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 ACTR2P61160 394 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 COG7P83436 770 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 CXCL9Q07325 125 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 RCN2Q14257 317 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 SYDE1Q6ZW31 735 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 HDAC11Q96DB2 347 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 CDK17Q00537 523 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 TARS2Q9BW92 718 aaKnown RBP15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 COPEO14579 308 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 NOP14P78316 857 aaKnown RBP15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 KRT17Q04695 432 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 MFSD14CQ5VZR4 134 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 PRMT7Q9NVM4 692 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 NAGPAQ9UK23 515 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 SEPT6Q14141 434 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 HEATR6Q6AI08 1181 aaKnown RBP15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 TRIM65Q6PJ69 517 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 CPA5Q8WXQ8 436 aa15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 RBM12Q9NTZ6 932 aaKnown RBP15.09■□□□□ 0.01
PCDHGA11-201ENST00000398587 SIGLEC1Q9BZZ2 1709 aa15.08■□□□□ 0.01
PCDHGA11-201ENST00000398587 GAS2O43903 313 aaKnown RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 BAG2O95816 211 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 BRAFP15056 766 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 DDR1Q08345 913 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ZNF677Q86XU0 584 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 RCOR2Q8IZ40 523 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ATP11CQ8NB49 1132 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 SENP7Q9BQF6 1050 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 DDX4Q9NQI0 724 aaKnown RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ERAP1Q9NZ08 941 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ALG6Q9Y672 507 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 A0A087X0T9 212 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 GOLGA8MH3BSY2 632 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 TNPO2O14787 897 aaKnown RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 TTI1O43156 1089 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 PHF2O75151 1096 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 FAM228BP0C875 321 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ZFXP17010 805 aaPredicted RBP15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ADORA2BP29275 332 aa15.08■□□□□ 0
PCDHGA11-201ENST00000398587 ROR1Q01973 937 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms