RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CACNG4Q9UBN1 327 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 GIT1Q9Y2X7 761 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 A0A0B4J269 797 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 NT5C1B-RDH14C9J2C7 533 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 UBE2HP62256 183 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 NOLC1Q14978 699 aaKnown RBP eCLIP17.26■□□□□ 0.35
MBD1-207ENST00000398488 POSTNQ15063 836 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 TMEM173Q86WV6 379 aaPredicted RBP17.26■□□□□ 0.35
MBD1-207ENST00000398488 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 COLGALT1Q8NBJ5 622 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 ZNF507Q8TCN5 953 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 HVCN1Q96D96 273 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 ACCSQ96QU6 501 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 GBP3Q9H0R5 595 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 LMBRD1Q9NUN5 540 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 PCDHB13Q9Y5F0 798 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 STYXL1Q9Y6J8 313 aa17.26■□□□□ 0.35
MBD1-207ENST00000398488 RALGAPA2Q2PPJ7 1873 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 C5orf67F2Z3F1 127 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 F8W810 466 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 CLDN3O15551 220 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 DNAJB1P25685 340 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 SPOUT1Q5T280 376 aaKnown RBP17.25■□□□□ 0.35
MBD1-207ENST00000398488 ALKAL1Q6UXT8 129 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 NELFCDQ8IXH7 590 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 KLHL23Q8NBE8 558 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 SLC17A8Q8NDX2 589 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 FBXO22Q8NEZ5 403 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 BCL7CQ8WUZ0 217 aaPredicted RBP17.25■□□□□ 0.35
MBD1-207ENST00000398488 TIGD1Q96MW7 591 aa17.25■□□□□ 0.35
MBD1-207ENST00000398488 ALG13Q9NP73 1137 aaKnown RBP17.25■□□□□ 0.35
MBD1-207ENST00000398488 GRM6O15303 877 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 TGFB1I1O43294 461 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 ITGB1P05556 798 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 SCP2P22307 547 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 IGFBP6P24592 240 aaPredicted RBP17.24■□□□□ 0.35
MBD1-207ENST00000398488 SLC11A1P49279 550 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 BCAR1P56945 870 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 CAMK1Q14012 370 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 NAB2Q15742 525 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 SLC10A6Q3KNW5 377 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 GLRA4Q5JXX5 417 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 ZMAT2Q96NC0 199 aaKnown RBP17.24■□□□□ 0.35
MBD1-207ENST00000398488 CBWD1Q9BRT8 395 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 UBN1Q9NPG3 1134 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 TRIP11Q15643 1979 aa17.24■□□□□ 0.35
MBD1-207ENST00000398488 H3BNC9 293 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 MYL1P05976 194 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 GALTP07902 379 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
MBD1-207ENST00000398488 DSC1Q08554 894 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 GPM6BQ13491 265 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 XKR4Q5GH76 650 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 CRELD2Q6UXH1 353 aaPredicted RBP17.23■□□□□ 0.35
MBD1-207ENST00000398488 COLGALT2Q8IYK4 626 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 PAAF1Q9BRP4 392 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 MSTO1Q9BUK6 570 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 EXOC1Q9NV70 894 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 PCDHA5Q9Y5H7 936 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 REV3LO60673 3130 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 PLXNA4Q9HCM2 1894 aa17.23■□□□□ 0.35
MBD1-207ENST00000398488 EYSQ5T1H1 3165 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 EIF3DO15371 548 aaKnown RBP eCLIP17.22■□□□□ 0.35
MBD1-207ENST00000398488 ZC3H11AO75152 810 aaKnown RBP eCLIP17.22■□□□□ 0.35
MBD1-207ENST00000398488 RHOBTB3O94955 611 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 CSPG5O95196 566 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 CXCL8P10145 99 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 ACOT2P49753 483 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 WNT7BP56706 349 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 SPAG1Q07617 926 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 ALCAMQ13740 583 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 HACE1Q8IYU2 909 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 SPPL3Q8TCT6 385 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 URGCPQ8TCY9 931 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 SNX27Q96L92 541 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 SAMD11Q96NU1 681 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 ACAP3Q96P50 834 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
MBD1-207ENST00000398488 MRPL9Q9BYD2 267 aaKnown RBP17.22■□□□□ 0.35
MBD1-207ENST00000398488 PCIF1Q9H4Z3 704 aa17.22■□□□□ 0.35
MBD1-207ENST00000398488 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 OGTO15294 1046 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 LAG3P18627 525 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 RNASELQ05823 741 aaKnown RBP17.21■□□□□ 0.35
MBD1-207ENST00000398488 SOX4Q06945 474 aaPredicted RBP17.21■□□□□ 0.35
MBD1-207ENST00000398488 ENOX2Q16206 610 aaKnown RBP17.21■□□□□ 0.35
MBD1-207ENST00000398488 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 KANK3Q6NY19 840 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 SMYD4Q8IYR2 804 aaPredicted RBP17.21■□□□□ 0.35
MBD1-207ENST00000398488 SYCP3Q8IZU3 236 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 SLC39A11Q8N1S5 342 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 SPATA20Q8TB22 786 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 SAAL1Q96ER3 474 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 PPP1R10Q96QC0 940 aaKnown RBP17.21■□□□□ 0.35
MBD1-207ENST00000398488 VN1R3Q9BXE9 311 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 CPSF3Q9UKF6 684 aaKnown RBP17.21■□□□□ 0.35
MBD1-207ENST00000398488 MAPK8IP1Q9UQF2 711 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms