RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ST13P5Q8NFI4 369 aaPredicted RBP13.35□□□□□ -0.27
TFF3-202ENST00000398431 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
TFF3-202ENST00000398431 STAMQ92783 540 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 CLSTN3Q9BQT9 956 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 RPP25Q9BUL9 199 aaKnown RBP13.35□□□□□ -0.27
TFF3-202ENST00000398431 TRIM6Q9C030 488 aaPredicted RBP13.35□□□□□ -0.27
TFF3-202ENST00000398431 POLR3FQ9H1D9 316 aaPredicted RBP13.35□□□□□ -0.27
TFF3-202ENST00000398431 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 FZD8Q9H461 694 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.35□□□□□ -0.27
TFF3-202ENST00000398431 ZDHHC7Q9NXF8 308 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 PARP2Q9UGN5 583 aa13.35□□□□□ -0.27
TFF3-202ENST00000398431 PTGESO14684 152 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 SRFP11831 508 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 GRIK3Q13003 919 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 HTR4Q13639 388 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 NAB2Q15742 525 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 FAM187BQ17R55 369 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 MAEAQ7L5Y9 396 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 CATSPER3Q86XQ3 398 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 NSUN7Q8NE18 718 aaKnown RBP13.34□□□□□ -0.27
TFF3-202ENST00000398431 LNX1Q8TBB1 728 aaPredicted RBP13.34□□□□□ -0.27
TFF3-202ENST00000398431 GPR152Q8TDT2 470 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 WASF1Q92558 559 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 PIDD1Q9HB75 910 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.34□□□□□ -0.27
TFF3-202ENST00000398431 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 CA14Q9ULX7 337 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 USP20Q9Y2K6 914 aa13.34□□□□□ -0.27
TFF3-202ENST00000398431 ZMYM2Q9UBW7 1377 aa13.33□□□□□ -0.27
TFF3-202ENST00000398431 VPS13AQ96RL7 3174 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 POTEMA6NI47 508 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 ADAM12O43184 909 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 USO1O60763 962 aaKnown RBP13.33□□□□□ -0.28
TFF3-202ENST00000398431 MED24O75448 989 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 TADA2AO75478 443 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 EDN1P05305 212 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 NTHL1P78549 312 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 TUSC3Q13454 348 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
TFF3-202ENST00000398431 CDCA2Q69YH5 1023 aaPredicted RBP13.33□□□□□ -0.28
TFF3-202ENST00000398431 PHLDB3Q6NSJ2 640 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 ELMSAN1Q6PJG2 1045 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 HACE1Q8IYU2 909 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 BSNDQ8WZ55 320 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 TBC1D17Q9HA65 648 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 SNTG2Q9NY99 539 aa13.33□□□□□ -0.28
TFF3-202ENST00000398431 GVINP1Q7Z2Y8 2422 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 CACNA1IQ9P0X4 2223 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 NOTCH4Q99466 2003 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 DMDP11532 3685 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 CASTOR2A6NHX0 329 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 LRRIQ4A6NIV6 560 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 STK25O00506 426 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 NEMFO60524 1076 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 JAK2O60674 1132 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 CD300LGQ6UXG3 332 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
TFF3-202ENST00000398431 GRASPQ7Z6J2 395 aaPredicted RBP13.32□□□□□ -0.28
TFF3-202ENST00000398431 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
TFF3-202ENST00000398431 HASPINQ8TF76 798 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 GTF3C6Q969F1 213 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 PDZD7Q9H5P4 517 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 SLC2A4RGQ9NR83 387 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 PRMT7Q9NVM4 692 aaPredicted RBP13.32□□□□□ -0.28
TFF3-202ENST00000398431 FBXW11Q9UKB1 542 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 NUMBLQ9Y6R0 609 aa13.32□□□□□ -0.28
TFF3-202ENST00000398431 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 EP300Q09472 2414 aaPredicted RBP13.31□□□□□ -0.28
TFF3-202ENST00000398431 KIF4AO95239 1232 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 DCNP07585 359 aaKnown RBP13.31□□□□□ -0.28
TFF3-202ENST00000398431 GLULP15104 373 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 FSHRP23945 695 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 ANAPC15P60006 121 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 GPC5P78333 572 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 ANKRD1Q15327 319 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 FAM171A1Q5VUB5 890 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 EEF1DP3Q658K8 133 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 PARM1Q6UWI2 310 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 FGF14Q92915 247 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 TTPALQ9BTX7 342 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 CCDC113Q9H0I3 377 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 POLD4Q9HCU8 107 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 BRMS1Q9HCU9 246 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
TFF3-202ENST00000398431 LRRN2O75325 713 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 RECQL4O94761 1208 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 THP07101 528 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 CYP11B2P19099 503 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 FOSBP53539 338 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 STARD6P59095 220 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 FOXK2Q01167 660 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 CREMQ03060 361 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 PSMD5Q16401 504 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 DCLRE1AQ6PJP8 1040 aa13.3□□□□□ -0.28
TFF3-202ENST00000398431 POTEHQ6S545 545 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms