RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 LIG1P18858 919 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 CCT6AP40227 531 aaKnown RBP15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 TUSC3Q13454 348 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 TDGQ13569 410 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 PALB2Q86YC2 1186 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 BSNDQ8WZ55 320 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 SMG7Q92540 1137 aaKnown RBP15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 IFT74Q96LB3 600 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 PHOX2BQ99453 314 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 PLEKHA4Q9H4M7 779 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 SH2B1Q9NRF2 756 aaPredicted RBP15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 FNIP2Q9P278 1114 aa15.77■□□□□ 0.12
SNRNP25-203ENST00000397876 CASTOR2A6NHX0 329 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 ACKR2O00590 384 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 GALR2O43603 387 aaPredicted RBP15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 RECQL4O94761 1208 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 MYBP10242 640 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 GBP2P32456 591 aaPredicted RBP15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 GLYCTKQ8IVS8 523 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 RABGGTAQ92696 567 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 ATOH1Q92858 354 aaPredicted RBP15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 CCDC113Q9H0I3 377 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 KCNK12Q9HB15 430 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 PIDD1Q9HB75 910 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 WDR6Q9NNW5 1121 aaKnown RBP15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 ZDHHC7Q9NXF8 308 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 SNTG2Q9NY99 539 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 IGSF9Q9P2J2 1179 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 LRWD1Q9UFC0 647 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 CACNA1HO95180 2353 aa15.76■□□□□ 0.11
SNRNP25-203ENST00000397876 TTLL13PA6NNM8 815 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 TGM5O43548 720 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 RFPL2O75678 378 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 THP07101 528 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 SPATA31D3P0C874 917 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 EFNA5P52803 228 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 DCAF4L1Q3SXM0 396 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 ASTLQ6HA08 431 aaPredicted RBP15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 SPATA31D4Q6ZUB0 917 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 TMEM105Q8N8V8 129 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 HASPINQ8TF76 798 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 KIFAP3Q92845 792 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 PAAF1Q9BRP4 392 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 RAB34Q9BZG1 259 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 BHMT2Q9H2M3 363 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 FAM86C1Q9NVL1 165 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 CACNG4Q9UBN1 327 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 FBXL21Q9UKT6 434 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 DUSP12Q9UNI6 340 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 STK24Q9Y6E0 443 aa15.75■□□□□ 0.11
SNRNP25-203ENST00000397876 PTGESO14684 152 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 KIF4AO95239 1232 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 RPL17P18621 184 aaKnown RBP15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 ELAVL2Q12926 359 aaKnown RBP15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 NBR1Q14596 966 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 RTP2Q5QGT7 225 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 PRSS55Q6UWB4 352 aaPredicted RBP15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 SNX29Q8TEQ0 813 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 ZNF707Q96C28 371 aaPredicted RBP15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 TTPALQ9BTX7 342 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 KIFC3Q9BVG8 833 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 NT5C3AQ9H0P0 336 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 KIAA1024Q9UPX6 916 aa15.74■□□□□ 0.11
SNRNP25-203ENST00000397876 H0Y858 1186 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 N4BP1O75113 896 aaKnown RBP15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 PAPLNO95428 1278 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 EDN1P05305 212 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 CLCN5P51795 746 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 PSMD5Q16401 504 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 LIN9Q5TKA1 542 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 ATF7IP2Q5U623 682 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 FAM171A1Q5VUB5 890 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 EEF1DP3Q658K8 133 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 PDXDC1Q6P996 788 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 LILRA6Q6PI73 481 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 CEP57Q86XR8 500 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 C4orf32Q8N8J7 132 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 FLCNQ8NFG4 579 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 PIK3R5Q8WYR1 880 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 PRKD2Q9BZL6 878 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 DDX19AQ9NUU7 478 aaKnown RBP15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 EPS15L1Q9UBC2 864 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 USP20Q9Y2K6 914 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
SNRNP25-203ENST00000397876 PHLPP2Q6ZVD8 1323 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 LAD1O00515 517 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 ZMYND10O75800 440 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 U2AF2P26368 475 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 PTGDRQ13258 359 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 PDIA5Q14554 519 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 ECM1Q16610 540 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 GET4Q7L5D6 327 aaPredicted RBP15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 IGSF22Q8N9C0 903 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 MYADMQ96S97 322 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 FBXW11Q9UKB1 542 aa15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 KIF3AQ9Y496 699 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms