RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 GOLGA6L10A0A0M3HER8 536 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 GOLGA6L10A6NI86 522 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PMM2O15305 246 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SV2AQ7L0J3 742 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CCDC60Q8IWA6 550 aaPredicted RBP19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZDHHC14Q8IZN3 488 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZNF280CQ8ND82 737 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SLC17A8Q8NDX2 589 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 FBXL13Q8NEE6 735 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 GPRASP2Q96D09 838 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SGSM3Q96HU1 749 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NAP1L3Q99457 506 aaPredicted RBP19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZSWIM1Q9BR11 485 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TRPC6Q9Y210 931 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 WDR81Q562E7 1941 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 STBD1O95210 358 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZBTB7AO95365 584 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MYZAPP0CAP1 466 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 UBL4BQ8N7F7 174 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 REPS2Q8NFH8 660 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KIFAP3Q92845 792 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NT5C1BQ96P26 610 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NUP85Q9BW27 656 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 XPNPEP1Q9NQW7 623 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 FAM114A2Q9NRY5 505 aa19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZNF214Q9UL59 606 aaPredicted RBP19.71■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PTPRAP18433 802 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 GPC3P51654 580 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 LLGL1Q15334 1064 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 LMBRD2Q68DH5 695 aaPredicted RBP19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SCYL3Q8IZE3 742 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FAM213AQ9BRX8 229 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 NTPCRQ9BSD7 190 aaKnown RBP19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 LRRC4CQ9HCJ2 640 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 COQ4Q9Y3A0 265 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 HMGB1P1B2RPK0 211 aaPredicted RBP19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MYO1FO00160 1098 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 GZMAP12544 262 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CYP24A1Q07973 514 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TMEM132BQ14DG7 1078 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 LRIG3Q6UXM1 1119 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ZNF564Q8TBZ8 553 aaPredicted RBP19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 NSUN6Q8TEA1 469 aaKnown RBP19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ATP6V0A1Q93050 837 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ZNF653Q96CK0 615 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 BICD1Q96G01 975 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 JPH2Q9BR39 696 aaPredicted RBP19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ERP44Q9BS26 406 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FAM107BQ9H098 131 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 RAB17Q9H0T7 212 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 GINM1Q9NU53 330 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ATP8A1Q9Y2Q0 1164 aa19.7■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MIF4GDA9UHW6 222 aaKnown RBP19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PEX5P50542 639 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PDE6CP51160 858 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MFSD14AQ96MC6 490 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FMO2Q99518 471 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 JPH1Q9HDC5 661 aaPredicted RBP19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SNX24Q9Y343 169 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SYNGAP1Q96PV0 1343 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PARP14Q460N5 1801 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TCRBV7S2A1N4TA0A589 114 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PPP1R12AO14974 1030 aaPredicted RBP19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PYGMP11217 842 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 KRT5P13647 590 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PRKCEQ02156 737 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DUPD1Q68J44 220 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TAS1R3Q7RTX0 852 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 JAMLQ86YT9 394 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PRELID2Q8N945 189 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 RDM1Q8NG50 284 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 GIMAP7Q8NHV1 300 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SPIRE2Q8WWL2 714 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FBXL18Q96ME1 805 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PICK1Q9NRD5 415 aa19.69■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CDR2Q01850 454 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 HVCN1Q96D96 273 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SENP7Q9BQF6 1050 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SPOPO43791 374 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PSAPP07602 524 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 FDX1P10109 184 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 LSP1P33241 339 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PLTPP55058 493 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ACTR2P61160 394 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TCEAL1Q15170 157 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MTERF2Q49AM1 385 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CYFIP1Q7L576 1253 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 GPD1LQ8N335 351 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 A1CFQ9NQ94 594 aaKnown RBP19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 CYP26B1Q9NR63 512 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 SLC9A2Q9UBY0 812 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 PNMA2Q9UL42 364 aa19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 ZNFX1Q9P2E3 1918 aaKnown RBP19.68■□□□□ 0.74
CHRFAM7A-202ENST00000397827 RPS12P25398 132 aaKnown RBP19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DSG3P32926 999 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 XRRA1Q6P2D8 792 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TTC27Q6P3X3 843 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 TMC2Q8TDI7 906 aa19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 DDX1Q92499 740 aaKnown RBP19.67■□□□□ 0.74
CHRFAM7A-202ENST00000397827 MAGOHBQ96A72 148 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms