RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 DYDC2Q96IM9 177 aa17.91■□□□□ 0.46
CUX2-202ENST00000397643 HINFPQ9BQA5 517 aa17.91■□□□□ 0.46
CUX2-202ENST00000397643 PAAF1Q9BRP4 392 aa17.91■□□□□ 0.46
CUX2-202ENST00000397643 SLKQ9H2G2 1235 aaPredicted RBP17.91■□□□□ 0.46
CUX2-202ENST00000397643 CDH7Q9ULB5 785 aa17.91■□□□□ 0.46
CUX2-202ENST00000397643 KCNJ14Q9UNX9 436 aa17.91■□□□□ 0.46
CUX2-202ENST00000397643 ZFP37Q9Y6Q3 630 aaPredicted RBP17.91■□□□□ 0.46
CUX2-202ENST00000397643 ACACBO00763 2458 aa17.91■□□□□ 0.46
CUX2-202ENST00000397643 KMT2BQ9UMN6 2715 aaPredicted RBP17.9■□□□□ 0.46
CUX2-202ENST00000397643 INO80B-WBP1J3KQ70 363 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 TBX3O15119 743 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 B4GALT5O43286 388 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 GCFC2P16383 781 aaKnown RBP17.9■□□□□ 0.46
CUX2-202ENST00000397643 CYP4A11Q02928 519 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 CREMQ03060 361 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 GRIK3Q13003 919 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 CTTNQ14247 550 aaKnown RBP17.9■□□□□ 0.46
CUX2-202ENST00000397643 MXD4Q14582 209 aaPredicted RBP17.9■□□□□ 0.46
CUX2-202ENST00000397643 XKR9Q5GH70 373 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 CLSTN3Q9BQT9 956 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 PHF20Q9BVI0 1012 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 ZSWIM4Q9H7M6 989 aa17.9■□□□□ 0.46
CUX2-202ENST00000397643 NOTCH4Q99466 2003 aa17.89■□□□□ 0.46
CUX2-202ENST00000397643 KANSL1LA0AUZ9 987 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 PSMA5P28066 241 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 ARL2P36404 184 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 SNW1Q13573 536 aaKnown RBP17.89■□□□□ 0.45
CUX2-202ENST00000397643 ZNF528Q3MIS6 628 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 NCAPH2Q6IBW4 605 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 OTUD6AQ7L8S5 288 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 NEK8Q86SG6 692 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.45
CUX2-202ENST00000397643 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 FGF13Q92913 245 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 SHDQ96IW2 340 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 NFKBIZQ9BYH8 718 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 KLK14Q9P0G3 267 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 MTF2Q9Y483 593 aaPredicted RBP17.89■□□□□ 0.45
CUX2-202ENST00000397643 VWA8A3KMH1 1905 aa17.89■□□□□ 0.45
CUX2-202ENST00000397643 A0A1B0GUA9 196 aa17.88■□□□□ 0.45
CUX2-202ENST00000397643 SLITRK3O94933 977 aa17.88■□□□□ 0.45
CUX2-202ENST00000397643 GLRA2P23416 452 aa17.88■□□□□ 0.45
CUX2-202ENST00000397643 HSP90AA2PQ14568 343 aaPredicted RBP17.88■□□□□ 0.45
CUX2-202ENST00000397643 MLF2Q15773 248 aaPredicted RBP17.88■□□□□ 0.45
CUX2-202ENST00000397643 RUFY3Q7L099 469 aa17.88■□□□□ 0.45
CUX2-202ENST00000397643 ITFG1Q8TB96 612 aa17.88■□□□□ 0.45
CUX2-202ENST00000397643 PIK3R5Q8WYR1 880 aa17.88■□□□□ 0.45
CUX2-202ENST00000397643 TRIM6Q9C030 488 aaPredicted RBP17.88■□□□□ 0.45
CUX2-202ENST00000397643 FBXO4Q9UKT5 387 aa17.88■□□□□ 0.45
CUX2-202ENST00000397643 SF3B1O75533 1304 aaKnown RBP eCLIP17.88■□□□□ 0.45
CUX2-202ENST00000397643 CCDC194A0A1B0GVG4 234 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 CPLX1O14810 134 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 ADAM12O43184 909 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 CCNT1O60563 726 aaKnown RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 KINO60870 393 aaKnown RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 TADA2AO75478 443 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 KIF4AO95239 1232 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 NPTXRO95502 500 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 C8AP07357 584 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 HNRNPA1P09651 372 aaKnown RBP eCLIP17.87■□□□□ 0.45
CUX2-202ENST00000397643 HOXA9P31269 272 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 ANAPC15P60006 121 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 NCBP1Q09161 790 aaKnown RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 TFDP1Q14186 410 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 RSPO4Q2I0M5 234 aaPredicted RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 EARS2Q5JPH6 523 aaKnown RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 SLC27A1Q6PCB7 646 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 HACE1Q8IYU2 909 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 LNX1Q8TBB1 728 aaPredicted RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 OXER1Q8TDS5 423 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 HASPINQ8TF76 798 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 ZNF274Q96GC6 653 aaPredicted RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
CUX2-202ENST00000397643 ZSWIM6Q9HCJ5 1215 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 GJB4Q9NTQ9 266 aa17.87■□□□□ 0.45
CUX2-202ENST00000397643 PTGESO14684 152 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 SPTLC1O15269 473 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 LYPLA2O95372 231 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 POU2F2P09086 479 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 PRKCQQ04759 706 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 SLC44A4Q53GD3 710 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 MTSS1LQ765P7 747 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 NELL1Q92832 810 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 HSD17B14Q9BPX1 270 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 TTPALQ9BTX7 342 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 BCO2Q9BYV7 579 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 OSBPL6Q9BZF3 934 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 CXCL16Q9H2A7 254 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 LTB4R2Q9NPC1 389 aa17.86■□□□□ 0.45
CUX2-202ENST00000397643 SPATA6Q9NWH7 488 aaPredicted RBP17.86■□□□□ 0.45
CUX2-202ENST00000397643 FAM205CA6NFA0 338 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 CASTOR2A6NHX0 329 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 CCL16O15467 120 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 LAMTOR5O43504 91 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 DGAT1O75907 488 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 TUSC3Q13454 348 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 UBXN2BQ14CS0 331 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 NAB2Q15742 525 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 PSMD5Q16401 504 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 PPM1LQ5SGD2 360 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms