RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NSMFQ6X4W1 530 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 KRT27Q7Z3Y8 459 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PODNQ7Z5L7 613 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FRMD5Q7Z6J6 570 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 VPS36Q86VN1 386 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 LCA5Q86VQ0 697 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 GBP7Q8N8V2 638 aaPredicted RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 KCNV2Q8TDN2 545 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 DCAF4Q8WV16 495 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PRCCQ92733 491 aaPredicted RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 KIFAP3Q92845 792 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 KLHL29Q96CT2 875 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 OPTNQ96CV9 577 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 IQCDQ96DY2 449 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 WDR11Q9BZH6 1224 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FAM129AQ9BZQ8 928 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 CCDC113Q9H0I3 377 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 UNC45AQ9H3U1 944 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 ECT2Q9H8V3 914 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 RMI1Q9H9A7 625 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TMEM165Q9HC07 324 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 ERVK-5Q9HDB9 667 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 SIX2Q9NPC8 291 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PCMTD2Q9NV79 361 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.38□□□□□ -1.557e-8■■■□□ 15.1
SSR1-202ENST00000397511 NYAP2Q9P242 653 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TSKSQ9UJT2 592 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 NOVA2Q9UNW9 492 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 PHF24Q9UPV7 400 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TRAF3IP3Q9Y228 551 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FRMD4BQ9Y2L6 1034 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MYO3BQ8WXR4 1341 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 IGLV3-22A0A075B6J6 115 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 E7ENQ6 273 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PGRMC1O00264 195 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 OATP04181 439 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PDHA1P08559 390 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MYCLP12524 364 aaPredicted RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 ATP6V1C1P21283 382 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 HSPA1LP34931 641 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PSMC2P35998 433 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 MSH2P43246 934 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FMO5P49326 533 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PLTPP55058 493 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MAGOHP61326 146 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 ZNF844Q08AG5 666 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 AP3B2Q13367 1082 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MYBPC2Q14324 1141 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MESDQ14696 234 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MYBPC3Q14896 1274 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 CMPK2Q5EBM0 449 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 ERMARDQ5T6L9 678 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 HS2ST1Q7LGA3 356 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MDM1Q8TC05 714 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 CTNNBL1Q8WYA6 563 aaPredicted RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 MAGOHBQ96A72 148 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 MASTLQ96GX5 879 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FAM118BQ9BPY3 351 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 CBWD1Q9BRT8 395 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PDGFDQ9GZP0 370 aaPredicted RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 RAB17Q9H0T7 212 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 VCX3BQ9H321 246 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 VCX3AQ9NNX9 186 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 DNAJC17Q9NVM6 304 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 ATXN10Q9UBB4 475 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 STK38LQ9Y2H1 464 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 SNX24Q9Y343 169 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 LRRC42Q9Y546 428 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PITPNM2Q9BZ72 1349 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 ZMYM2Q9UBW7 1377 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CYP3A7-CYP3A51PA0A087WV96 503 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 ARHGEF35A5YM69 484 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 F8VZ95 297 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 IPO5O00410 1097 aaKnown RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 HGSO14964 777 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 ATP6V1G1O75348 118 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 EYA4O95677 639 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 GSTA2P09210 222 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 POLR2MP0CAP2 368 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 TNFAIP3P21580 790 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CYP3A7P24462 503 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 PSMC4P43686 418 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 NCALDP61601 193 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 DPY19L2P1Q6NXN4 242 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 RINLQ6ZS11 566 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 SESTD1Q86VW0 696 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CCDC25Q86WR0 208 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 REM2Q8IYK8 340 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 NLGN1Q8N2Q7 840 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 PPM1KQ8N3J5 372 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 EIF1ADQ8N9N8 165 aaKnown RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 IL31RAQ8NI17 732 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CRYGNQ8WXF5 182 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 MKL1Q969V6 931 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 HSD17B14Q9BPX1 270 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 UBE2OQ9C0C9 1292 aaKnown RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 DMAP1Q9NPF5 467 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 ADAM22Q9P0K1 906 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CTTNBP2NLQ9P2B4 639 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CNOT8Q9UFF9 292 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms