RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PPP3CAQ08209 521 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 LPIN1Q14693 890 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 PCBP1Q15365 356 aaKnown RBP eCLIP23.02■■□□□ 1.281e-8■■■■■ 43
CPNE1-204ENST00000397443 CBWD6Q4V339 395 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 CBWD3Q5JTY5 395 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 CBWD5Q5RIA9 395 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 SLC27A1Q6PCB7 646 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 PARD3BQ8TEW8 1205 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 TRIM6Q9C030 488 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-204ENST00000397443 ATP11BQ9Y2G3 1177 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 HES2Q9Y543 173 aa23.02■■□□□ 1.28
CPNE1-204ENST00000397443 CD4P01730 458 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 STAG3L1P0CL83 205 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 COL6A1P12109 1028 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 TLE2Q04725 743 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 C1orf220Q5T0J3 134 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 TWF2Q6IBS0 349 aaKnown RBP23.01■■□□□ 1.27
CPNE1-204ENST00000397443 CPLX3Q8WVH0 158 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 FNBP1Q96RU3 617 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 SEZ6LQ9BYH1 1024 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 C11orf49Q9H6J7 331 aa23.01■■□□□ 1.27
CPNE1-204ENST00000397443 CPSF3Q9UKF6 684 aaKnown RBP23.01■■□□□ 1.27
CPNE1-204ENST00000397443 TLR3O15455 904 aaKnown RBP23■■□□□ 1.27
CPNE1-204ENST00000397443 CXCL8P10145 99 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 IBSPP21815 317 aaPredicted RBP23■■□□□ 1.27
CPNE1-204ENST00000397443 FMO5P49326 533 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 GOLGA8FQ08AF8 430 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 GOLGA8DPQ0D2H9 430 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 PAK2Q13177 524 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 APOL6Q9BWW8 343 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 PADI3Q9ULW8 664 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 MROH7Q68CQ1 1323 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 DCDC2CA8MYV0 355 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 TNNI1P19237 187 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 AXLP30530 894 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 ENOX2Q16206 610 aaKnown RBP23■■□□□ 1.27
CPNE1-204ENST00000397443 FAM26DQ5JW98 314 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 ANKLE1Q8NAG6 615 aa23■■□□□ 1.27
CPNE1-204ENST00000397443 RPF1Q9H9Y2 349 aaKnown RBP23■■□□□ 1.27
CPNE1-204ENST00000397443 FAM207AQ9NSI2 230 aaPredicted RBP23■■□□□ 1.27
CPNE1-204ENST00000397443 GPR182O15218 404 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 APBA1Q02410 837 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 MBTPS1Q14703 1052 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 PSMD6Q15008 389 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 DCAF4L1Q3SXM0 396 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 TRAF7Q6Q0C0 670 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 CCDC186Q7Z3E2 898 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 BRSK2Q8IWQ3 736 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 CAGE1Q8TC20 777 aa22.99■■□□□ 1.27
CPNE1-204ENST00000397443 CAND2O75155 1236 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 MYL7Q01449 175 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 KCNMA1Q12791 1236 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 LRRC8DQ7L1W4 858 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 USP37Q86T82 979 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 TMC2Q8TDI7 906 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 ERGIC2Q96RQ1 377 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 PPP1R12CQ9BZL4 782 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 NXF3Q9H4D5 531 aaKnown RBP22.98■■□□□ 1.27
CPNE1-204ENST00000397443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.98■■□□□ 1.271e-6■■■■■ 117.8
CPNE1-204ENST00000397443 SNTG2Q9NY99 539 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 PTPRJQ12913 1337 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 UMODL1Q5DID0 1318 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 A0A1W2PQC6 194 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 CLTAP09496 248 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 SELPP16109 830 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 FAAP100Q0VG06 881 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 BFSP2Q13515 415 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 ARID5BQ14865 1188 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 ANKRD33Q7Z3H0 272 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 APBB1IPQ7Z5R6 666 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-204ENST00000397443 LSM14BQ9BX40 385 aaKnown RBP22.98■■□□□ 1.27
CPNE1-204ENST00000397443 GCNT4Q9P109 453 aa22.98■■□□□ 1.27
CPNE1-204ENST00000397443 GOLGA6L6A8MZA4 724 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 TRIM21P19474 475 aaKnown RBP22.97■■□□□ 1.27
CPNE1-204ENST00000397443 EN2P19622 333 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-204ENST00000397443 SLC9A1P19634 815 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 MXI1P50539 228 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 HSP90AA2PQ14568 343 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-204ENST00000397443 LRRC26Q2I0M4 334 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 UBXN11Q5T124 520 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 TMEM117Q9H0C3 514 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 ERVK-5Q9HDB9 667 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 SIK3Q9Y2K2 1263 aa22.97■■□□□ 1.27
CPNE1-204ENST00000397443 ACTN1P12814 892 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 RBL2Q08999 1139 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 EXOC3L4Q17RC7 722 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 NECAB2Q7Z6G3 386 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 PPFIBP1Q86W92 1011 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 ZNF516Q92618 1163 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 ACAP3Q96P50 834 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 CCDC94Q9BW85 323 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-204ENST00000397443 HIPK3Q9H422 1215 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 ZSCAN20P17040 1043 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-204ENST00000397443 AKAP5P24588 427 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 GBP6Q6ZN66 633 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 RNF19AQ9NV58 838 aa22.96■■□□□ 1.27
CPNE1-204ENST00000397443 ITIH6Q6UXX5 1313 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 LACTBL1A8MY62 500 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 EPHB6O15197 1021 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 MEFVO15553 781 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms