RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 NT5C1B-RDH14C9J2C7 533 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 ACTN4O43707 911 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 PROZP22891 400 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 GRM5P41594 1212 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 ALCAMQ13740 583 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 SKIV2LQ15477 1246 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 GRAMD1CQ8IYS0 662 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 SYCP3Q8IZU3 236 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 MICAL1Q8TDZ2 1067 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 POF1BQ8WVV4 589 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 TOPORSQ9NS56 1045 aaPredicted RBP27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 FAN1Q9Y2M0 1017 aa27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 FAM237AA0A1B0GTK4 181 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 DDHD2O94830 711 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 GALTP07902 379 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 CASP1P29466 404 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 UBE3AQ05086 875 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 CUL4BQ13620 913 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 CNNM4Q6P4Q7 775 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 UNC13DQ70J99 1090 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 MAP4K3Q8IVH8 894 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 TMEM169Q96HH4 297 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 TMEM175Q9BSA9 504 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 DNAJB4Q9UDY4 337 aa27.74■■■□□ 2.03
TSPAN4-207ENST00000397411 PRRC2BQ5JSZ5 2229 aaKnown RBP27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 INPPL1O15357 1258 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 ZNF202O95125 648 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 MYBP10242 640 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 OR1G1P47890 313 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 GRIK3Q13003 919 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 SLFN12LQ6IEE8 588 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 GOLPH3LQ9H4A5 285 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 CHD9Q3L8U1 2897 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 ZMYM2Q9UBW7 1377 aa27.73■■■□□ 2.03
TSPAN4-207ENST00000397411 PVALEFA0A1B0GWK0 134 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 PIGRP01833 764 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 THP07101 528 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 SLC11A1P49279 550 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 PLCB3Q01970 1234 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 MCL1Q07820 350 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 KYAT1Q16773 422 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 TIGD5Q53EQ6 642 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 L1TD1Q5T7N2 865 aaKnown RBP27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 SLC39A11Q8N1S5 342 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 CEP120Q8N960 986 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 MSTO1Q9BUK6 570 aa27.72■■■□□ 2.03
TSPAN4-207ENST00000397411 BMS1Q14692 1282 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 SEZ6Q53EL9 994 aa27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 FAM26FQ5R3K3 315 aa27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 KRBA2Q6ZNG9 492 aa27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 HPS3Q969F9 1004 aa27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 CCDC47Q96A33 483 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 COLEC11Q9BWP8 271 aa27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 TMEM206Q9H813 350 aa27.71■■■□□ 2.03
TSPAN4-207ENST00000397411 ANKRD63C9JTQ0 380 aa27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 ABLIM1O14639 778 aa27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 PRPF6O94906 941 aaKnown RBP27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 KANK3Q6NY19 840 aa27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 COLGALT2Q8IYK4 626 aa27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 IPO9Q96P70 1041 aaKnown RBP27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 TLR9Q9NR96 1032 aa27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 LZTS1Q9Y250 596 aa27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 PRG3Q9Y2Y8 225 aaPredicted RBP27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 PLXNA4Q9HCM2 1894 aa27.7■■■□□ 2.02
TSPAN4-207ENST00000397411 NRP1O14786 923 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 OGTO15294 1046 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 PPP1R37O75864 691 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 MYL1P05976 194 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 CLTAP09496 248 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 DNAJB1P25685 340 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 CASP5P51878 434 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 POSTNQ15063 836 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 GSTCDQ8NEC7 633 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 POMGNT1Q8WZA1 660 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 PPP2R3CQ969Q6 453 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 IGSF21Q96ID5 467 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 STRA6Q9BX79 667 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 NSUN3Q9H649 340 aaKnown RBP27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 ENTPD7Q9NQZ7 604 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 EXOC1Q9NV70 894 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 TRIP11Q15643 1979 aa27.69■■■□□ 2.02
TSPAN4-207ENST00000397411 CITO14578 2027 aa27.68■■■□□ 2.02
TSPAN4-207ENST00000397411 TULP1O00294 542 aaPredicted RBP27.68■■■□□ 2.02
TSPAN4-207ENST00000397411 CA8P35219 290 aa27.68■■■□□ 2.02
TSPAN4-207ENST00000397411 TUSC3Q13454 348 aa27.68■■■□□ 2.02
TSPAN4-207ENST00000397411 TMC7Q7Z402 723 aa27.68■■■□□ 2.02
TSPAN4-207ENST00000397411 TSHZ2Q9NRE2 1034 aa27.68■■■□□ 2.02
TSPAN4-207ENST00000397411 A0A0B4J269 797 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 B4GALT3O60512 393 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 DSC1Q08554 894 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 KCNA1Q09470 495 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 GLRA4Q5JXX5 417 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 PDE12Q6L8Q7 609 aaKnown RBP27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 SLC39A4Q6P5W5 647 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 FGFBP2Q9BYJ0 223 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 HAPLN2Q9GZV7 340 aa27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 RPF1Q9H9Y2 349 aaKnown RBP27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 AGO2Q9UKV8 859 aaKnown RBP27.67■■■□□ 2.02
TSPAN4-207ENST00000397411 PTGESO14684 152 aa27.66■■■□□ 2.02
TSPAN4-207ENST00000397411 ERVFC1P60507 584 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms