RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 MIIPQ5JXC2 388 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 EEF1DP3Q658K8 133 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 TRAF7Q6Q0C0 670 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 MPZL3Q6UWV2 235 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 DEFB128Q7Z7B8 93 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 MRFAP1L1Q96HT8 127 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 VPS16Q9H269 839 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 METTL14Q9HCE5 456 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 ANKFY1Q9P2R3 1169 aa18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 ARMCX3Q9UH62 379 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 AGO2Q9UKV8 859 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-205ENST00000397406 TMEM265A0A087WTH1 108 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 GOLGA8IPA6NC78 632 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 GOLGA8JA6NMD2 632 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 CLDN3O15551 220 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 CBFA2T2O43439 604 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 FAM189A1O60320 539 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 CTSHP09668 335 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 NR1I3Q14994 352 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 CATSPER4Q7RTX7 472 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 GPD1LQ8N335 351 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 TIFAQ96CG3 184 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 CPB2Q96IY4 423 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 MSTO1Q9BUK6 570 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 PDZD7Q9H5P4 517 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 ZNF576Q9H609 170 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 RTN4Q9NQC3 1192 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 TANC1Q9C0D5 1861 aa18.45■□□□□ 0.54
TSPAN4-205ENST00000397406 PRUNE2Q8WUY3 3088 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 PITPNM1O00562 1244 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 EXTL3O43909 919 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 ADRB2P07550 413 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 PRKCSHP14314 528 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 MYOGP15173 224 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 SFPQP23246 707 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■■□ 23.9
TSPAN4-205ENST00000397406 RABGGTBP53611 331 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 MCCD1P59942 119 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 RBL2Q08999 1139 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 NOLC1Q14978 699 aaKnown RBP eCLIP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 SNRNP35Q16560 246 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 FILIP1LQ4L180 1135 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 CRELD2Q6UXH1 353 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 ZBTB33Q86T24 672 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 FAM228AQ86W67 206 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 CDR2LQ86X02 465 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 CBWD2Q8IUF1 395 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 RDH13Q8NBN7 331 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 ANP32BQ92688 251 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 CDT1Q9H211 546 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 KIAA1586Q9HCI6 787 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 NOC2LQ9Y3T9 749 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 SCN5AQ14524 2016 aa18.44■□□□□ 0.54
TSPAN4-205ENST00000397406 CHD7Q9P2D1 2997 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 A0A1B0GUA9 196 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 LGALS16A8MUM7 142 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 N4BP3O15049 544 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 TEX33O43247 280 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 LDHAP00338 332 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 CKBP12277 381 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 CDC25BP30305 580 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 HOXA11P31270 313 aaPredicted RBP18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 MATR3P43243 847 aaKnown RBP eCLIP18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 TMEM132AQ24JP5 1023 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 ZNF568Q3ZCX4 644 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 VWA3BQ502W6 1294 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 ZNF618Q5T7W0 954 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 PDLIM2Q96JY6 352 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 FAM213AQ9BRX8 229 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 AGPAT5Q9NUQ2 364 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 CITO14578 2027 aa18.43■□□□□ 0.54
TSPAN4-205ENST00000397406 RALGAPA2Q2PPJ7 1873 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 OGTO15294 1046 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 TPM2P07951 284 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 AXLP30530 894 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 BFSP1Q12934 665 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 ZBTB41Q5SVQ8 909 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 INTS8Q75QN2 995 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 RPUSD2Q8IZ73 545 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 SLC35C1Q96A29 364 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 MFSD14AQ96MC6 490 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 TCHPQ9BT92 498 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 OSBPL7Q9BZF2 842 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 NKX2-4Q9H2Z4 354 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 NDST4Q9H3R1 872 aa18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN4-205ENST00000397406 NBNO60934 754 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 ARHGEF15O94989 841 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 TPM3P06753 285 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 MCF2P10911 925 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 HARSP12081 509 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 PBX1P40424 430 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 ACOT2P49753 483 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 PPP2R3AQ06190 1150 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 CYP24A1Q07973 514 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 MBTPS1Q14703 1052 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 FBXO47Q5MNV8 452 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 CAGE1Q8TC20 777 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 PLEKHO2Q8TD55 490 aa18.41■□□□□ 0.54
TSPAN4-205ENST00000397406 ZNF233A6NK53 670 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms