RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 DNAJC7Q99615 494 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 CDT1Q9H211 546 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 ASB7Q9H672 318 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 PLEKHA5Q9HAU0 1116 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 ZKSCAN5Q9Y2L8 839 aa20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 TRIP12Q14669 1992 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-204ENST00000397404 GOLGA8IPA6NC78 632 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 GOLGA8JA6NMD2 632 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 EDN1P05305 212 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 FECHP22830 423 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 CASP14P31944 242 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 ZNF200P98182 395 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 CACNA2D4Q7Z3S7 1137 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 ZSCAN30Q86W11 494 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 ZNF333Q96JL9 665 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 ZBTB45Q96K62 511 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 CGRRF1Q99675 332 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 SENP6Q9GZR1 1112 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 CRISPLD2Q9H0B8 497 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 RPF1Q9H9Y2 349 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 HTTP42858 3142 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 TTC26A0AVF1 554 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 LRRIQ3A6PVS8 624 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 B4GALT4O60513 344 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 PON1P27169 355 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 HNRNPH3P31942 346 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 KRT9P35527 623 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 GRM5P41594 1212 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 CDK17Q00537 523 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 KCNMA1Q12791 1236 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 HACE1Q8IYU2 909 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 FBXL13Q8NEE6 735 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 DEFB118Q96PH6 123 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 CCDC94Q9BW85 323 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 HAPLN2Q9GZV7 340 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 TMX1Q9H3N1 280 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 ABHD10Q9NUJ1 306 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 GINS2Q9Y248 185 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 CDY2AQ9Y6F7 541 aa20.62■□□□□ 0.89
TSPAN4-204ENST00000397404 ARHGAP6O43182 974 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 B4GALT5O43286 388 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 CCDC172P0C7W6 258 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 TNNI1P19237 187 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 ACOT2P49753 483 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 MGAT3Q09327 533 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 C1orf53Q5VUE5 145 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 TMTC1Q8IUR5 882 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 EHBP1Q8NDI1 1231 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 CACTINQ8WUQ7 758 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 FAXDC2Q96IV6 333 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 TOPORSQ9NS56 1045 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 DERAQ9Y315 318 aa20.61■□□□□ 0.89
TSPAN4-204ENST00000397404 TLR3O15455 904 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 CCP110O43303 1012 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 RPS6KA5O75582 802 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 PARNO95453 639 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 SGPL1O95470 568 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 TRIM49P0CI25 452 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 TRIM49CP0CI26 452 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 MSNP26038 577 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 HOXA11P31270 313 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 CDK7P50613 346 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 TMEM62Q0P6H9 643 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 DUOXA2Q1HG44 320 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 KLHDC7AQ5VTJ3 777 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 TRIM65Q6PJ69 517 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 ENOSF1Q7L5Y1 443 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 ZBTB33Q86T24 672 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 CCDC127Q96BQ5 260 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 ACAP3Q96P50 834 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 BAG1Q99933 345 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 LSM14BQ9BX40 385 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 TRIM6Q9C030 488 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 TMEM117Q9H0C3 514 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 FAM207AQ9NSI2 230 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 APEX2Q9UBZ4 518 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 PLAGL2Q9UPG8 496 aa20.6■□□□□ 0.89
TSPAN4-204ENST00000397404 DLATP10515 647 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 SKILP12757 684 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 UCHL3P15374 230 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 THPOP40225 353 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 FXR1P51114 621 aaKnown RBP eCLIP20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 PPP3CAQ08209 521 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 BFSP2Q13515 415 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 ZACNQ401N2 412 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 CBWD6Q4V339 395 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 EPC2Q52LR7 807 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 CBWD3Q5JTY5 395 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 CBWD5Q5RIA9 395 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 C1orf220Q5T0J3 134 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 CYP26C1Q6V0L0 522 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 C15orf39Q6ZRI6 1047 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 JAKMIP2Q96AA8 810 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 ZNF668Q96K58 619 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 TRAIPQ9BWF2 469 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 C2CD2Q9Y426 696 aa20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
TSPAN4-204ENST00000397404 TTLL13PA6NNM8 815 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 STAG3L1P0CL83 205 aa20.58■□□□□ 0.89
TSPAN4-204ENST00000397404 SKIP12755 728 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms