RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 M0R2N6 131 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 SLC37A4O43826 429 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 TADA2AO75478 443 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 YWHABP31946 246 aaKnown RBP16.66■□□□□ 0.26
SEC13-206ENST00000397102 MXD4Q14582 209 aaPredicted RBP16.66■□□□□ 0.26
SEC13-206ENST00000397102 OTUD6AQ7L8S5 288 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
SEC13-206ENST00000397102 BLIDQ8IZY5 108 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 DAGLBQ8NCG7 672 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 CLDN23Q96B33 292 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 FAM20AQ96MK3 541 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 NELL2Q99435 816 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 MTRQ99707 1265 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 PHF20Q9BVI0 1012 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 AGXT2Q9BYV1 514 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 SPTBN2O15020 2390 aa16.66■□□□□ 0.26
SEC13-206ENST00000397102 NOTCH4Q99466 2003 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 INO80B-WBP1J3KQ70 363 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 NCAM2O15394 837 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 TBC1D4O60343 1298 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 XYLBO75191 536 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 C8AP07357 584 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 POU2F2P09086 479 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 CD72P21854 359 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 RPS9P46781 194 aaKnown RBP16.65■□□□□ 0.26
SEC13-206ENST00000397102 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
SEC13-206ENST00000397102 BLOC1S2Q6QNY1 142 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 ITFG1Q8TB96 612 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 PIK3R5Q8WYR1 880 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 CLSTN3Q9BQT9 956 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 LXNQ9BS40 222 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
SEC13-206ENST00000397102 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 PRMT8Q9NR22 394 aaPredicted RBP16.65■□□□□ 0.26
SEC13-206ENST00000397102 USP18Q9UMW8 372 aa16.65■□□□□ 0.26
SEC13-206ENST00000397102 CCL16O15467 120 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
SEC13-206ENST00000397102 TGM1P22735 817 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 AKAP5P24588 427 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 TARSP26639 723 aaKnown RBP16.64■□□□□ 0.25
SEC13-206ENST00000397102 MBTD1Q05BQ5 628 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 TFDP1Q14186 410 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 EPHA7Q15375 998 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 PSMD5Q16401 504 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 AMHR2Q16671 573 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 XKR9Q5GH70 373 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 BMP2KLQ5H9B9 411 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 TRIM22Q8IYM9 498 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 KCNB2Q92953 911 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 JAKMIP1Q96N16 626 aaKnown RBP16.64■□□□□ 0.25
SEC13-206ENST00000397102 KXD1Q9BQD3 176 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 TTPALQ9BTX7 342 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 FAM126AQ9BYI3 521 aaPredicted RBP16.64■□□□□ 0.25
SEC13-206ENST00000397102 XPNPEP1Q9NQW7 623 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 GMEB2Q9UKD1 530 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 POLIQ9UNA4 740 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 VWA8A3KMH1 1905 aa16.64■□□□□ 0.25
SEC13-206ENST00000397102 DCDC2BA2VCK2 349 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 ADRB1P08588 477 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
SEC13-206ENST00000397102 NPY5RQ15761 445 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 INF2Q27J81 1249 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 GALNT17Q6IS24 598 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 SLC27A1Q6PCB7 646 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 TSSK4Q6SA08 328 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 TPRG1Q6ZUI0 275 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 NPAS3Q8IXF0 933 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
SEC13-206ENST00000397102 LNX1Q8TBB1 728 aaPredicted RBP16.63■□□□□ 0.25
SEC13-206ENST00000397102 PAAF1Q9BRP4 392 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 NCOA5Q9HCD5 579 aaKnown RBP16.63■□□□□ 0.25
SEC13-206ENST00000397102 KLK14Q9P0G3 267 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 PARP2Q9UGN5 583 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 KCNH3Q9ULD8 1083 aa16.63■□□□□ 0.25
SEC13-206ENST00000397102 ECI2O75521 394 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 DEXIO95424 95 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 NPTXRO95502 500 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 RPS6KB1P23443 525 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
SEC13-206ENST00000397102 EVCP57679 992 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
SEC13-206ENST00000397102 TUSC3Q13454 348 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 CAPSQ13938 189 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 ST3GAL2Q16842 350 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 UVSSAQ2YD98 709 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 FAM171A1Q5VUB5 890 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 PDXDC1Q6P996 788 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 ZNF852Q6ZMS4 543 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 KRT25Q7Z3Z0 450 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 CEP57Q86XR8 500 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 SLC7A14Q8TBB6 771 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 NFKBIZQ9BYH8 718 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 ZSWIM4Q9H7M6 989 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 PARD6AQ9NPB6 346 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 RGL1Q9NZL6 768 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 CACNG4Q9UBN1 327 aa16.62■□□□□ 0.25
SEC13-206ENST00000397102 MRPS17Q9Y2R5 130 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms