RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TNFSF9P41273 254 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 ZNF445P59923 1031 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 LRRC63Q05C16 580 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 IQCB1Q15051 598 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
NUP98-205ENST00000397007 SMYD4Q8IYR2 804 aaPredicted RBP11.6□□□□□ -0.55
NUP98-205ENST00000397007 CEP120Q8N960 986 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 MKNK1Q9BUB5 465 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 PLAGL2Q9UPG8 496 aa11.6□□□□□ -0.55
NUP98-205ENST00000397007 YBX2Q9Y2T7 364 aaKnown RBP11.6□□□□□ -0.55
NUP98-205ENST00000397007 OGTO15294 1046 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 POU3F3P20264 500 aaPredicted RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 CCNE1P24864 410 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 ERCC5P28715 1186 aaPredicted RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 COL19A1Q14993 1142 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 KYAT1Q16773 422 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 BRSK2Q8IWQ3 736 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 COLGALT2Q8IYK4 626 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 MYOCDQ8IZQ8 938 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 DPF3Q92784 378 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 PRDM5Q9NQX1 630 aaPredicted RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 EXOC1Q9NV70 894 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 EXTL3O43909 919 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 LRPAP1P30533 357 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 DHX8Q14562 1220 aaKnown RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 DHX40Q8IX18 779 aaKnown RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 VN1R3Q9BXE9 311 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 TBC1D7Q9P0N9 293 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 PCDHA11Q9Y5I1 949 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 TMEM265A0A087WTH1 108 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 SLC16A3O15427 465 aaKnown RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 SMC2O95347 1197 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 STAU1O95793 577 aaKnown RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 CYP3A5P20815 502 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 MLKLQ8NB16 471 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 PIN4Q9Y237 131 aaKnown RBP11.59□□□□□ -0.55
NUP98-205ENST00000397007 C2orf16Q68DN1 1984 aa11.59□□□□□ -0.55
NUP98-205ENST00000397007 GCNT3O95395 438 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 SSBP05455 408 aaKnown RBP eCLIP11.58□□□□□ -0.55
NUP98-205ENST00000397007 PSMD6Q15008 389 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.55
NUP98-205ENST00000397007 SLFN12LQ6IEE8 588 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.55
NUP98-205ENST00000397007 CATSPER4Q7RTX7 472 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 EFCAB13Q8IY85 973 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 ZNF516Q92618 1163 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 GBP3Q9H0R5 595 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 UBN1Q9NPG3 1134 aa11.58□□□□□ -0.55
NUP98-205ENST00000397007 ARL5CA6NH57 179 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 FSCN2O14926 492 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 DEFB128Q7Z7B8 93 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 P2RX5Q93086 422 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 MARCH5Q9NX47 278 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 HSPBP1Q9NZL4 362 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 NOTCH4Q99466 2003 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 LRRC10BA6NIK2 292 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 INO80B-WBP1J3KQ70 363 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 AKAP3O75969 853 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 SOX4Q06945 474 aaPredicted RBP11.58□□□□□ -0.56
NUP98-205ENST00000397007 ZSCAN23Q3MJ62 389 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 VRTNQ9H8Y1 702 aa11.58□□□□□ -0.56
NUP98-205ENST00000397007 LCHNA4D1U4 455 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 SOX1O00570 391 aaPredicted RBP11.57□□□□□ -0.56
NUP98-205ENST00000397007 CAMK4Q16566 473 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 NT5DC4Q86YG4 428 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 LMO3Q8TAP4 145 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 GOLGA5Q8TBA6 731 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 BCL7CQ8WUZ0 217 aaPredicted RBP11.57□□□□□ -0.56
NUP98-205ENST00000397007 TMEM117Q9H0C3 514 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
NUP98-205ENST00000397007 C2CD2Q9Y426 696 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 COL4A2P08572 1712 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 LPXNO60711 386 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 LILRB3O75022 631 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 STAG3L1P0CL83 205 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 CEP63Q96MT8 703 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 PBX4Q9BYU1 374 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 EXOC7Q9UPT5 735 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 COQ4Q9Y3A0 265 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 PIRO00625 290 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 DDHD2O94830 711 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 CLTAP09496 248 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 CHMP4BP1P59074 171 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 CYP24A1Q07973 514 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 CAMK1Q14012 370 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 ENOX1Q8TC92 643 aaKnown RBP11.57□□□□□ -0.56
NUP98-205ENST00000397007 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 TMEM175Q9BSA9 504 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 ASB7Q9H672 318 aa11.57□□□□□ -0.56
NUP98-205ENST00000397007 HOOK1Q9UJC3 728 aaKnown RBP11.57□□□□□ -0.56
NUP98-205ENST00000397007 TRIM49BA6NDI0 452 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 RECQL4O94761 1208 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 AMHP03971 560 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 NR3C1P04150 777 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 CASP4P49662 377 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 GATMP50440 423 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 FILIP1Q7Z7B0 1213 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 CD302Q8IX05 232 aa11.56□□□□□ -0.56
NUP98-205ENST00000397007 GPD1LQ8N335 351 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms