RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 XYLBO75191 536 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 POU2F2P09086 479 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 GLRA2P23416 452 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 TUSC3Q13454 348 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 UVSSAQ2YD98 709 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 MCPH1Q8NEM0 835 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 PRMT7Q9NVM4 692 aaPredicted RBP19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 DLGAP2Q9P1A6 1054 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 PARP2Q9UGN5 583 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 FBXW11Q9UKB1 542 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 NUMBLQ9Y6R0 609 aa19.4■□□□□ 0.7
EXOSC3-202ENST00000396521 PFKFB2O60825 505 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 AKAP5P24588 427 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 KRT2P35908 639 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 MAGEA9P43362 315 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 RARRES1P49788 294 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 PFKPQ01813 784 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 PRKCQQ04759 706 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 SCRN1Q12765 414 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 ANKRD1Q15327 319 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 CALCRLQ16602 461 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 FAM187BQ17R55 369 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 RSPO2Q6UXX9 243 aaPredicted RBP19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 PJA1Q8NG27 643 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 ASAP3Q8TDY4 903 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 RUBCNQ92622 972 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 OSBPL6Q9BZF3 934 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 C2orf40Q9H1Z8 148 aa19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 TTC12Q9H892 705 aaPredicted RBP19.39■□□□□ 0.69
EXOSC3-202ENST00000396521 DCHS1Q96JQ0 3298 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 F8W810 466 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 NPTXRO95502 500 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 THP07101 528 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 SP9P0CG40 484 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 ZNF528Q3MIS6 628 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 ZBTB8OSQ8IWT0 167 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 OXER1Q8TDS5 423 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 B3GALT6Q96L58 329 aa19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 LARP6Q9BRS8 491 aaKnown RBP19.38■□□□□ 0.69
EXOSC3-202ENST00000396521 C2orf16Q68DN1 1984 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 N4BP3O15049 544 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 DCNP07585 359 aaKnown RBP19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 MYBP10242 640 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 PUM1Q14671 1186 aaKnown RBP eCLIP19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 SPECC1Q5M775 1068 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 RTP2Q5QGT7 225 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 PPM1LQ5SGD2 360 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 FAM171A1Q5VUB5 890 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 NELL2Q99435 816 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 ADPGKQ9BRR6 497 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 BCO2Q9BYV7 579 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 POLR3FQ9H1D9 316 aaPredicted RBP19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 FZD8Q9H461 694 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 ORC3Q9UBD5 711 aaPredicted RBP19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 FBXO4Q9UKT5 387 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 KCNH3Q9ULD8 1083 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 R4GN57 208 aa19.37■□□□□ 0.69
EXOSC3-202ENST00000396521 KANSL1LA0AUZ9 987 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 LRRIQ4A6NIV6 560 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 B4GALT5O43286 388 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 C8AP07357 584 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 PSMD5Q16401 504 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 CDCA2Q69YH5 1023 aaPredicted RBP19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 GRASPQ7Z6J2 395 aaPredicted RBP19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 GLYCTKQ8IVS8 523 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 GPR161Q8N6U8 529 aaKnown RBP19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 LNX1Q8TBB1 728 aaPredicted RBP19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 CLSTN3Q9BQT9 956 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 DDX23Q9BUQ8 820 aaKnown RBP19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 KLK14Q9P0G3 267 aa19.36■□□□□ 0.69
EXOSC3-202ENST00000396521 NEMFO60524 1076 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 KINO60870 393 aaKnown RBP19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 RPL17P18621 184 aaKnown RBP19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 SDHBP21912 280 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 RBM25P49756 843 aaKnown RBP19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 GPC5P78333 572 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 RAB33AQ14088 237 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 MAPK6Q16659 721 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 PRSS55Q6UWB4 352 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 DGLUCYQ7Z3D6 616 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 APBB1IPQ7Z5R6 666 aaPredicted RBP19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 CEP57Q86XR8 500 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 FGF13Q92913 245 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 FGF14Q92915 247 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 NACC1Q96RE7 527 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 HINFPQ9BQA5 517 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 TUFT1Q9NNX1 390 aa19.35■□□□□ 0.69
EXOSC3-202ENST00000396521 OTOGLQ3ZCN5 2332 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 SPTLC1O15269 473 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 NCAM2O15394 837 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 TRAPPC3O43617 180 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 TXKP42681 527 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 NR5A1Q13285 461 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 EARS2Q5JPH6 523 aaKnown RBP19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 PARM1Q6UWI2 310 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 PIGOQ8TEQ8 1089 aa19.34■□□□□ 0.69
EXOSC3-202ENST00000396521 TNFRSF25Q93038 417 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms