RNA–Protein interactions for RNA: ENST00000396052.3

LYRM1-202, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 1,659 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-202ENST00000396052 SIM2Q14190 667 aaPredicted RBP13.47□□□□□ -0.25
LYRM1-202ENST00000396052 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.25
LYRM1-202ENST00000396052 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
LYRM1-202ENST00000396052 PLA2G4FQ68DD2 849 aa13.47□□□□□ -0.25
LYRM1-202ENST00000396052 EXOC8Q8IYI6 725 aa13.47□□□□□ -0.25
LYRM1-202ENST00000396052 LNX1Q8TBB1 728 aaPredicted RBP13.47□□□□□ -0.25
LYRM1-202ENST00000396052 BICD2Q8TD16 824 aa13.47□□□□□ -0.25
LYRM1-202ENST00000396052 PSPC1Q8WXF1 523 aaKnown RBP13.47□□□□□ -0.25
LYRM1-202ENST00000396052 PIK3R5Q8WYR1 880 aa13.47□□□□□ -0.25
LYRM1-202ENST00000396052 DNMT3BQ9UBC3 853 aaKnown RBP13.47□□□□□ -0.25
LYRM1-202ENST00000396052 NDRG2Q9UN36 371 aaKnown RBP13.47□□□□□ -0.25
LYRM1-202ENST00000396052 BAHCC1Q9P281 2608 aa13.47□□□□□ -0.25
LYRM1-202ENST00000396052 CHD8Q9HCK8 2581 aa13.46□□□□□ -0.25
LYRM1-202ENST00000396052 TDRD15B5MCY1 1934 aaKnown RBP13.46□□□□□ -0.25
LYRM1-202ENST00000396052 ASAP2O43150 1006 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 TSPAN1O60635 241 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 PROS1P07225 676 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 CNR2P34972 360 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 RCAN1P53805 252 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 PSMC5P62195 406 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.26
LYRM1-202ENST00000396052 Q4G0T1 1027 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 PABPC1LQ4VXU2 614 aaKnown RBP13.46□□□□□ -0.26
LYRM1-202ENST00000396052 IL31Q6EBC2 164 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 NOTUMQ6P988 496 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 TMEM143Q96AN5 459 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 ELSPBP1Q96BH3 223 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 CSRNP2Q9H175 543 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 DHX33Q9H6R0 707 aaKnown RBP13.46□□□□□ -0.26
LYRM1-202ENST00000396052 HCFC1R1Q9NWW0 138 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 PPME1Q9Y570 386 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 CACNA1GO43497 2377 aa13.46□□□□□ -0.26
LYRM1-202ENST00000396052 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.263e-9■■■■■ 206.8
LYRM1-202ENST00000396052 HRO43593 1189 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 ADD1P35611 737 aaKnown RBP13.45□□□□□ -0.26
LYRM1-202ENST00000396052 LIMK1P53667 647 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 NPEPPSP55786 919 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
LYRM1-202ENST00000396052 GRIK3Q13003 919 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
LYRM1-202ENST00000396052 ACAP1Q15027 740 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 PSMD5Q16401 504 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 RTL10Q7L3V2 364 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
LYRM1-202ENST00000396052 HACE1Q8IYU2 909 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 RNF149Q8NC42 400 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 SLC7A14Q8TBB6 771 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 MCRS1Q96EZ8 462 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 TTPALQ9BTX7 342 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 LMAN1LQ9HAT1 526 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 GDE1Q9NZC3 331 aa13.45□□□□□ -0.26
LYRM1-202ENST00000396052 MRPS23Q9Y3D9 190 aaKnown RBP13.45□□□□□ -0.26
LYRM1-202ENST00000396052 DOCK6Q96HP0 2047 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 KLF18A0A0U1RQI7 1052 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 TM4SF5O14894 197 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 CXCL12P48061 93 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 AXDND1Q5T1B0 1012 aaPredicted RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 TANGO2Q6ICL3 276 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 CEP57Q86XR8 500 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 TCP11Q8WWU5 503 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 ING5Q8WYH8 240 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 CPB2Q96IY4 423 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 CEP170P1Q96L14 293 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 ZMYM2Q9UBW7 1377 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 CCDC196A0A1B0GTZ2 297 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 ADAM12O43184 909 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 PRPF3O43395 683 aaKnown RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 HOXB3P14651 431 aaPredicted RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 AKAP5P24588 427 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 RFC5P40937 340 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 RAB33AQ14088 237 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 FAM171A1Q5VUB5 890 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 PDXDC1Q6P996 788 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 POTEHQ6S545 545 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 FAM3CQ92520 227 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 PAAF1Q9BRP4 392 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 TRIM6Q9C030 488 aaPredicted RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 NXF3Q9H4D5 531 aaKnown RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 BRD9Q9H8M2 597 aa13.44□□□□□ -0.26
LYRM1-202ENST00000396052 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
LYRM1-202ENST00000396052 CYP3A7-CYP3A51PA0A087WV96 503 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 CYP3A7P24462 503 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 QARSP47897 775 aaKnown RBP13.43□□□□□ -0.26
LYRM1-202ENST00000396052 SATB1Q01826 763 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 LONP2Q86WA8 852 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 CCDC148Q8NFR7 591 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 TBCKQ8TEA7 893 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 TRPV5Q9NQA5 729 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 CACNG4Q9UBN1 327 aa13.43□□□□□ -0.26
LYRM1-202ENST00000396052 CHURC1-FNTBB4DL54 471 aa13.42□□□□□ -0.26
LYRM1-202ENST00000396052 RHOP08100 348 aa13.42□□□□□ -0.26
LYRM1-202ENST00000396052 CHRNB1P11230 501 aa13.42□□□□□ -0.26
LYRM1-202ENST00000396052 FNTBP49356 437 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms