RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 HDAC1Q13547 482 aaPredicted RBP15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 PPM1LQ5SGD2 360 aa15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 RHPN2Q8IUC4 686 aa15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 CCDC82Q8N4S0 544 aa15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 GAD1Q99259 594 aa15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 UBN1Q9NPG3 1134 aa15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 SUCLA2Q9P2R7 463 aaPredicted RBP15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 ADAM28Q9UKQ2 775 aa15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 NAV2Q8IVL1 2488 aa15.36■□□□□ 0.05
VCPKMT-201ENST00000395859 TICRRQ7Z2Z1 1910 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 TMEM150BA6NC51 233 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 ARNTLO00327 626 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 ADAM12O43184 909 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 EDIL3O43854 480 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 XYLBO75191 536 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 CIITAP33076 1130 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 MLH1P40692 756 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 SCNN1GP51170 649 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 CCDC6Q16204 474 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 PABPC1LQ4VXU2 614 aaKnown RBP15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 SOWAHCQ53LP3 525 aaPredicted RBP15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 LIN9Q5TKA1 542 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 WDR5BQ86VZ2 330 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 LNX1Q8TBB1 728 aaPredicted RBP15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 PIK3R5Q8WYR1 880 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 FAM3CQ92520 227 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 ZFP42Q96MM3 310 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 COLEC11Q9BWP8 271 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 ZNF334Q9HCZ1 680 aaPredicted RBP15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 IPPQ9Y573 584 aa15.35■□□□□ 0.05
VCPKMT-201ENST00000395859 KALRNO60229 2985 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 SMCO2A6NFE2 343 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 CALM1P0DP23 149 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 CALM2P0DP24 149 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 CALM3P0DP25 149 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 LIFRP42702 1097 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 UVSSAQ2YD98 709 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 C12orf50Q8NA57 414 aaPredicted RBP15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 CNNM3Q8NE01 707 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 ING5Q8WYH8 240 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 MCRS1Q96EZ8 462 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 SAMM50Q9Y512 469 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 VWA8A3KMH1 1905 aa15.34■□□□□ 0.05
VCPKMT-201ENST00000395859 AXIN1O15169 862 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 CAPNS1P04632 268 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 ITGA4P13612 1032 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 DNM2P50570 870 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 MLLT6P55198 1093 aaPredicted RBP15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 MTERF2Q49AM1 385 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 B3GNT9Q6UX72 402 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 RTL10Q7L3V2 364 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 TMTC2Q8N394 836 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 SLC7A14Q8TBB6 771 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 ZCCHC14Q8WYQ9 949 aaKnown RBP15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 NLRP4Q96MN2 994 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 SH2D3AQ9BRG2 576 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 EIF2AQ9BY44 585 aaKnown RBP15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 GLT8D2Q9H1C3 349 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 BARHL2Q9NY43 387 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 MRPS23Q9Y3D9 190 aaKnown RBP15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 PIAS3Q9Y6X2 628 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 ADAMTS20P59510 1910 aa15.33■□□□□ 0.04
VCPKMT-201ENST00000395859 hCG_1984214I3L0E3 225 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 CEBPBP17676 345 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 NOVA1P51513 510 aaKnown RBP15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 ZNF252P-AS1Q0IIN9 211 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 FOXC1Q12948 553 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 RAB33AQ14088 237 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 GRM2Q14416 872 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 XKR3Q5GH77 459 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 PRSS36Q5K4E3 855 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 AXDND1Q5T1B0 1012 aaPredicted RBP15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 JAKMIP3Q5VZ66 844 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 SRGAP1Q7Z6B7 1085 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 RAB11FIP4Q86YS3 637 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 ZNF713Q8N859 430 aaPredicted RBP15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 IRF7Q92985 503 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 SCNM1Q9BWG6 230 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 SMOC1Q9H4F8 434 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 BRD9Q9H8M2 597 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 POLIQ9UNA4 740 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 PCDHGA5Q9Y5G8 931 aa15.32■□□□□ 0.04
VCPKMT-201ENST00000395859 MSH4O15457 936 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 PRC1O43663 620 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 NR1I2O75469 434 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 RHOP08100 348 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 SFNP31947 248 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 PSMD5Q16401 504 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 PRR16Q569H4 304 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 FAM78AQ5JUQ0 283 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 HEATR6Q6AI08 1181 aaKnown RBP15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 Q6ZS52 159 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 CEP68Q76N32 757 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 GAB3Q8WWW8 586 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 TMEM87BQ96K49 555 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 TTPALQ9BTX7 342 aa15.31■□□□□ 0.04
VCPKMT-201ENST00000395859 TRMT61BQ9BVS5 477 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms