RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CAPN11Q9UMQ6 739 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 SLC4A7Q9Y6M7 1214 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 TMEM259Q4ZIN3 620 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 FAM117BQ6P1L5 589 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 EXOC4Q96A65 974 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 SUFUQ9UMX1 484 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 ALKQ9UM73 1620 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 KDM6AO15550 1401 aaPredicted RBP11□□□□□ -0.65
COL4A6-203ENST00000394872 PYGLP06737 847 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 HMBSP08397 361 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 IRF1P10914 325 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 PMS2P54278 862 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 GTF2H3Q13889 308 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 TMEM132DQ14C87 1099 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 PID1Q7Z2X4 250 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 NEUROG2Q9H2A3 272 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 SCOCQ9UIL1 159 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 NCK2O43639 380 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 ATP9BO43861 1147 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 XKR3Q5GH77 459 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 PRR5LQ6MZQ0 368 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 FRMD5Q7Z6J6 570 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 FAM96AQ9H5X1 160 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 CLCA2Q9UQC9 943 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 PSMD14O00487 310 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 PRRG1O14668 218 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SYF2O95926 243 aaKnown RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 NR1H3Q13133 447 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 MORC4Q8TE76 937 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SPAG7O75391 227 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 RPS6KA5O75582 802 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 MORF4L2Q15014 288 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 VPS72Q15906 364 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 WDR72Q3MJ13 1102 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 PRAMEF18Q5VWM3 479 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 ZC3H18Q86VM9 953 aaKnown RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 ZBED8Q8IZ13 594 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 GUF1Q8N442 669 aaKnown RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SMYD3Q9H7B4 428 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SNX9Q9Y5X1 595 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 POLRMTO00411 1230 aaKnown RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 CYP26A1O43174 497 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SKIP12755 728 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 RBP5P82980 135 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 ATP2C1P98194 919 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 CDC42EP5Q6NZY7 148 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 PPHLN1Q8NEY8 458 aaKnown RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SEPT5Q99719 369 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SLC13A1Q9BZW2 595 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 KIF17Q9P2E2 1029 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 EFTUD2Q15029 972 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 FASTKD1Q53R41 847 aaKnown RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 ASAP3Q8TDY4 903 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 SNF8Q96H20 258 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 EIF2AQ9BY44 585 aaKnown RBP10.99□□□□□ -0.65
COL4A6-203ENST00000394872 HSPBP1Q9NZL4 362 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 TULP4Q9NRJ4 1543 aa10.99□□□□□ -0.65
COL4A6-203ENST00000394872 TADA3O75528 432 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ACOT2P49753 483 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 SYTL3Q4VX76 610 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 DDIASQ8IXT1 998 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 AGPAT1Q99943 283 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 BPIFA3Q9BQP9 254 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 CCL15-CCL14A0A0B4J2E2 113 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 GYG2O15488 501 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ITGA4P13612 1032 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ZNF543Q08ER8 600 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 SNX17Q15036 470 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 CCL15Q16663 113 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 LINC00116Q8NCU8 138 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 GTF3C2Q8WUA4 911 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 SEPT1Q8WYJ6 367 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 CENPKQ9BS16 269 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 YIPF2Q9BWQ6 316 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 TSSK1BQ9BXA7 367 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 STXBP3O00186 592 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 KIAA0391O15091 583 aaKnown RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 DGAT1O75907 488 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 NDUFB10O96000 172 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 GNL1P36915 607 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 NFRKBQ6P4R8 1299 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 DIAPH2O60879 1101 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 CHRNA3P32297 505 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 RGS7P49802 495 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 FAM47EQ6ZV65 393 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 GLYCTKQ8IVS8 523 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 C1orf54Q8WWF1 131 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ATXN7L3BQ96GX2 97 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 SH2D3AQ9BRG2 576 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ZFP69BQ9UJL9 534 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms