RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZNF341Q9BYN7 854 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 UNC45AQ9H3U1 944 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 ECT2Q9H8V3 914 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 CD248Q9HCU0 757 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 STAM2O75886 525 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 YWHABP31946 246 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 YWHAEP62258 255 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MYBPC2Q14324 1141 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SNRNP35Q16560 246 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SPDYCQ5MJ68 293 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SPATA21Q7Z572 469 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 RHOT1Q8IXI2 618 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 ARHGAP24Q8N264 748 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MCPH1Q8NEM0 835 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 FERMT1Q9BQL6 677 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 FAM213AQ9BRX8 229 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 ARL2BPQ9Y2Y0 163 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 TMEM120BA0PK00 339 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 CDH16O75309 829 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 GZMAP12544 262 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SFNP31947 248 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SLC1A1P43005 524 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 IZUMO3Q5VZ72 239 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 ETNPPLQ8TBG4 499 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 EPS8L3Q8TE67 593 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 ARHGEF26Q96DR7 871 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 HES6Q96HZ4 224 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 RBM41Q96IZ5 413 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
UBE2D3-209ENST00000394804 SORBS3O60504 671 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 RAD17O75943 681 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 LUC7L3O95232 432 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 TNFAIP1Q13829 316 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 BMT2Q1RMZ1 405 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 LNX1Q8TBB1 728 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 RMDN3Q96TC7 470 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 DNAI2Q9GZS0 605 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 LRRD1A4D1F6 860 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 MAPK13O15264 365 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CIITAP33076 1130 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 MYO1EQ12965 1108 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 STAT4Q14765 748 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CENPUQ71F23 418 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 ATP8B4Q8TF62 1192 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 GRAMD1AQ96CP6 724 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 TTC25Q96NG3 672 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SEMA4AQ9H3S1 761 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 NCANO14594 1321 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 FRMPD4Q14CM0 1322 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 ATXN2Q99700 1313 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 MYO5AQ9Y4I1 1855 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 I3L4J1 428 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 NKRFO15226 690 aaKnown RBP eCLIP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SLITRK3O94933 977 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 TJP3O95049 919 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SPATA31C1P0DKV0 1188 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SNRPFP62306 86 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CBWD6Q4V339 395 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CBWD3Q5JTY5 395 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CBWD5Q5RIA9 395 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 LGSNQ5TDP6 509 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SLC30A10Q6XR72 485 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 PASD1Q8IV76 773 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 PRPF38AQ8NAV1 312 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 KDM4CQ9H3R0 1056 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 FGFR1OP2Q9NVK5 253 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SGPL1O95470 568 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 TAL1P17542 331 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CLK2P49760 499 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 ITIH4Q14624 930 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 APOBEC3HQ6NTF7 200 aaKnown RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 OTOP1Q7RTM1 612 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CTAGE3PQ8IX95 158 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 MKL1Q969V6 931 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 PGM2Q96G03 612 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 CBWD1Q9BRT8 395 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 GGT7Q9UJ14 662 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 SNED1Q8TER0 1413 aa12.44□□□□□ -0.42
UBE2D3-209ENST00000394804 GRIN2DO15399 1336 aa12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 PSAPP07602 524 aa12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 CCND2P30279 289 aa12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 HOXA10P31260 410 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 KYNUQ16719 465 aa12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 TRIM68Q6AZZ1 485 aa12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 TRIM72Q6ZMU5 477 aa12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 TAB3Q8N5C8 712 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 SLC7A3Q8WY07 619 aa12.43□□□□□ -0.42
UBE2D3-209ENST00000394804 CDHR1Q96JP9 859 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms