RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 IGKV6D-21A0A0A0MT36 114 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 EXTL3O43909 919 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 GRIN3BO60391 1043 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 MMEP08473 750 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 SP4Q02446 784 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 ARL8AQ96BM9 186 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 NR2E1Q9Y466 385 aa16.5■□□□□ 0.23
UBE2D3-207ENST00000394801 PIGRP01833 764 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 PEX5P50542 639 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 EMC2Q15006 297 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 TTMPQ5BVD1 217 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 CYFIP1Q7L576 1253 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 TATDN2Q93075 761 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 CEP89Q96ST8 783 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 PORCNQ9H237 461 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 ACP6Q9NPH0 428 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 ZNF302Q9NR11 478 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 GTF3C4Q9UKN8 822 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 WDR90Q96KV7 1748 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 UTRNP46939 3433 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 OATP04181 439 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 PDE6CP51160 858 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 HLTFQ14527 1009 aaKnown RBP eCLIP16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 PSMD6Q15008 389 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 UBL4BQ8N7F7 174 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 ZNF526Q8TF50 670 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 ZNF516Q92618 1163 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 CD101Q93033 1021 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 LRRC45Q96CN5 670 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 ZSWIM1Q9BR11 485 aa16.49■□□□□ 0.23
UBE2D3-207ENST00000394801 TTI1O43156 1089 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 IVLP07476 585 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 HSPA6P17066 643 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 ARL2P36404 184 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 POLGP54098 1239 aaPredicted RBP16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 LRRC31Q6UY01 552 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 DDX42Q86XP3 938 aaKnown RBP eCLIP16.48■□□□□ 0.234e-7■■■□□ 18.4
UBE2D3-207ENST00000394801 PSPC1Q8WXF1 523 aaKnown RBP16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 BICD1Q96G01 975 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 WNT8AQ9H1J5 351 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.231e-7■■■■■ 61.1
UBE2D3-207ENST00000394801 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 UVRAGQ9P2Y5 699 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 GOLGA6L10A0A0M3HER8 536 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 KRT14P02533 472 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 NAMPTP43490 491 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 LIG4P49917 911 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 SKOR1P84550 965 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 FSTL1Q12841 308 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 LRIG3Q6UXM1 1119 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 RIOX2Q8IUF8 465 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 TRPC6Q9Y210 931 aa16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 UTP11Q9Y3A2 253 aaKnown RBP16.48■□□□□ 0.23
UBE2D3-207ENST00000394801 DAPK3O43293 454 aa16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 COMTP21964 271 aa16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 GLRA2P23416 452 aa16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 EDNRBP24530 442 aa16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 ALDH5A1P51649 535 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 ZACNQ401N2 412 aa16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 KRT35Q92764 455 aa16.47■□□□□ 0.23
UBE2D3-207ENST00000394801 A6NNZ2 444 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 SORBS3O60504 671 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 C4BPAP04003 597 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 STRN3Q13033 797 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 VGLL4Q14135 290 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 DHX34Q14147 1143 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 TUBB8Q3ZCM7 444 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 PROCA1Q8NCQ7 364 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 ZNF564Q8TBZ8 553 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 RAB17Q9H0T7 212 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 FAM187AA6NFU0 413 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 VGLL3A8MV65 326 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 H0YGN5 161 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 GGPS1O95749 300 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 HSD17B3P37058 310 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 DRG2P55039 364 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 ZNF211Q13398 564 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 MESDQ14696 234 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 TARBP2Q15633 366 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 TREML2Q5T2D2 321 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 SLFN12LQ6IEE8 588 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 ASAP3Q8TDY4 903 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 DHX38Q92620 1227 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 TMEM143Q96AN5 459 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms