RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TRIM49CP0CI26 452 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 ACTN1P12814 892 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
RTN4-205ENST00000394609 CNGA1P29973 690 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 RFC5P40937 340 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 RTP1P59025 263 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 ZBED6P86452 979 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 NFIL3Q16649 462 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 ERCC6LQ2NKX8 1250 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 WDR59Q6PJI9 974 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 RRAGAQ7L523 313 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 TAS1R3Q7RTX0 852 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 SLC9A9Q8IVB4 645 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 SLC17A8Q8NDX2 589 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 NEK11Q8NG66 645 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
RTN4-205ENST00000394609 RABGGTAQ92696 567 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 ZNF668Q96K58 619 aaPredicted RBP7.55□□□□□ -1.2
RTN4-205ENST00000394609 DNAJC7Q99615 494 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 ABHD16BQ9H3Z7 469 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 ZCCHC17Q9NP64 241 aaKnown RBP7.55□□□□□ -1.2
RTN4-205ENST00000394609 NLRC4Q9NPP4 1024 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 SLC5A4Q9NY91 659 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 HSPBP1Q9NZL4 362 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 EXOC7Q9UPT5 735 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 PPP2R2CQ9Y2T4 447 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
RTN4-205ENST00000394609 A0A0U1RQJ8 604 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 RBM47A0AV96 593 aaKnown RBP7.54□□□□□ -1.2
RTN4-205ENST00000394609 CCDC151A5D8V7 595 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 HNRNPDLO14979 420 aaKnown RBP7.54□□□□□ -1.2
RTN4-205ENST00000394609 ZSCAN12O43309 604 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 MAFO75444 373 aaPredicted RBP7.54□□□□□ -1.2
RTN4-205ENST00000394609 NOL4O94818 638 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 LGALS2P05162 132 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 GJB1P08034 283 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 SRGAP2CP0DJJ0 459 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 SLC9A1P19634 815 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 CTGFP29279 349 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 CHMP4BP1P59074 171 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 POLR2FP61218 127 aaKnown RBP7.54□□□□□ -1.2
RTN4-205ENST00000394609 IGBP1P78318 339 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 DLG4P78352 724 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 SREBF2Q12772 1141 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 BRD3Q15059 726 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 ZSCAN26Q16670 478 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 FIGNQ5HY92 759 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 SLC39A4Q6P5W5 647 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 CYP26C1Q6V0L0 522 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 CACNA2D4Q7Z3S7 1137 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 CBWD2Q8IUF1 395 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 TMTC1Q8IUR5 882 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 MAP4K3Q8IVH8 894 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 METTL13Q8N6R0 699 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 XXYLT1Q8NBI6 393 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 MNS1Q8NEH6 495 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 PPTC7Q8NI37 304 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 DEPTORQ8TB45 409 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 PRPF31Q8WWY3 499 aaKnown RBP7.54□□□□□ -1.2
RTN4-205ENST00000394609 ATRIPQ8WXE1 791 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 LENG1Q96BZ8 264 aaPredicted RBP7.54□□□□□ -1.2
RTN4-205ENST00000394609 BICD1Q96G01 975 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 FAM167AQ96KS9 214 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 MKNK1Q9BUB5 465 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 C1QTNF2Q9BXJ5 285 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 NAA15Q9BXJ9 866 aaKnown RBP7.54□□□□□ -1.2
RTN4-205ENST00000394609 ERAP1Q9NZ08 941 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 ARHGAP28Q9P2N2 729 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 EMSYQ7Z589 1322 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 CENPFP49454 3210 aa7.54□□□□□ -1.2
RTN4-205ENST00000394609 A0A1W2PQJ5 194 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ERICH4A6NGS2 130 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 LRRC53A6NM62 1247 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 K7ERI5 159 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 TNPO2O14787 897 aaKnown RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 DYNC1LI2O43237 492 aaPredicted RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 INSRRP14616 1297 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PON1P27169 355 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CASQ1P31415 396 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 NAMPTP43490 491 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 TM4SF4P48230 202 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 SLC26A2P50443 739 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 TNFAIP2Q03169 654 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 BFSP1Q12934 665 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CAPSQ13938 189 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 MYBPC2Q14324 1141 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 EXOC3L4Q17RC7 722 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 DUSP28Q4G0W2 176 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CBWD6Q4V339 395 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CBWD3Q5JTY5 395 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CBWD5Q5RIA9 395 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 IQSEC1Q6DN90 963 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 REXO1L1PQ8IX06 675 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ACRBPQ8NEB7 543 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 OR6J1Q8NGC5 347 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 POMGNT1Q8WZA1 660 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CCDC127Q96BQ5 260 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 HVCN1Q96D96 273 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms