RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 BTBD7Q9P203 1132 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 CLPTM1O96005 669 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 FOSP01100 380 aaPredicted RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 JAK1P23458 1154 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 CENPAP49450 140 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 EFL1Q7Z2Z2 1120 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 VSTM4Q8IW00 320 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 CCDC36Q8IYA8 594 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 SH3TC2Q8TF17 1288 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 ZBTB40Q9NUA8 1239 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 KLHL3Q9UH77 587 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 FGD5Q6ZNL6 1462 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 WDR36Q8NI36 951 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 UBASH3BQ8TF42 649 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 PPP1R14BQ96C90 147 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 WNT8AQ9H1J5 351 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 HSPBP1Q9NZL4 362 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 TLR2O60603 784 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 CAND2O75155 1236 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 SFSWAPQ12872 951 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 UGP2Q16851 508 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 MIS18BP1Q6P0N0 1132 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 ELMOD1Q8N336 334 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 EMC3Q9P0I2 261 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 CARMIL3Q8ND23 1372 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 MYH14Q7Z406 1995 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 SCN8AQ9UQD0 1980 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 BAIAP3O94812 1187 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 ROR1Q01973 937 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 STX4Q12846 297 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 STAT4Q14765 748 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 TSNQ15631 228 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 C2CD6Q53TS8 623 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 H2AFYO75367 372 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 ENO3P13929 434 aaPredicted RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 RABGEF1Q9UJ41 708 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 ADCY9O60503 1353 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 SMCO3A2RU48 225 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 PGM3O95394 542 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 CPA1P15085 419 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 HIBADHP31937 336 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 RNF135Q8IUD6 432 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 ZNF786Q8N393 782 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 EVPLQ92817 2033 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 REXO4Q9GZR2 422 aaKnown RBP14.1□□□□□ -0.15
USP49-203ENST00000394253 SLITRK6Q9H5Y7 841 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 PCDHA7Q9UN72 937 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 HEY1Q9Y5J3 304 aa14.1□□□□□ -0.15
USP49-203ENST00000394253 FCGR1AP12314 374 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 OLFML1Q6UWY5 402 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 PPM1NQ8N819 430 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 ZWILCHQ9H900 591 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 PALMO75781 387 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 TRAP1Q12931 704 aaKnown RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 CCDC157Q569K6 752 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 CC2D1AQ6P1N0 951 aaPredicted RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 MTHFD1LQ6UB35 978 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 ATP6V1HQ9UI12 483 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 JAK2O60674 1132 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 ARHGDIBP52566 201 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 TAP1Q03518 808 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 C7orf31Q8N865 590 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 MLXIPLQ9NP71 852 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 NDFIP2Q9NV92 336 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 BFARQ9NZS9 450 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 NFIL3Q16649 462 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 C12orf60Q5U649 245 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 ZSCAN20P17040 1043 aaPredicted RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 ME3Q16798 604 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 CDO1Q16878 200 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 PROM2Q8N271 834 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 WASLO00401 505 aaPredicted RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 PHKG1Q16816 387 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 ZNF507Q8TCN5 953 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 CAAP1Q9H8G2 361 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 CCDC59Q9P031 241 aaKnown RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 PYCARDQ9ULZ3 195 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 ZNF532Q9HCE3 1301 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 FBXW10Q5XX13 1052 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 FAM192AQ9GZU8 254 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 NMRK1Q9NWW6 199 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 PLCH2O75038 1416 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 MEI4A8MW99 385 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 A8MXQ7 604 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 SEMA3EO15041 775 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 CNOT3O75175 753 aaKnown RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 BYSLQ13895 437 aaKnown RBP14.09□□□□□ -0.15
USP49-203ENST00000394253 TAF2Q6P1X5 1199 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 CNBD1Q8NA66 436 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 B3GALT6Q96L58 329 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 SH3GLB1Q9Y371 365 aa14.09□□□□□ -0.15
USP49-203ENST00000394253 GCC2Q8IWJ2 1684 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 ARHGAP31Q2M1Z3 1444 aa14.08□□□□□ -0.15
USP49-203ENST00000394253 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms