RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 RNASE9P60153 205 aaKnown RBP7.74□□□□□ -1.17
SMAD1-202ENST00000394092 PTENP60484 403 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 CDR2Q01850 454 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 EMC2Q15006 297 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 SPDYCQ5MJ68 293 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 SLFN12LQ6IEE8 588 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 LRIG3Q6UXM1 1119 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 ZNF677Q86XU0 584 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 CCDC60Q8IWA6 550 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-202ENST00000394092 CD302Q8IX05 232 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 GPC2Q8N158 579 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 PLEKHO2Q8TD55 490 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 SLC20A1Q8WUM9 679 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 DHX38Q92620 1227 aaKnown RBP7.74□□□□□ -1.17
SMAD1-202ENST00000394092 ARHGEF26Q96DR7 871 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 RNPC3Q96LT9 517 aaKnown RBP7.74□□□□□ -1.17
SMAD1-202ENST00000394092 ZIM3Q96PE6 472 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 FNBP1Q96RU3 617 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 SH2D3AQ9BRG2 576 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 TMEM106CQ9BVX2 250 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 DDX47Q9H0S4 455 aaKnown RBP7.74□□□□□ -1.17
SMAD1-202ENST00000394092 POLR3FQ9H1D9 316 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-202ENST00000394092 WNT8AQ9H1J5 351 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 GOLPH3Q9H4A6 298 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 ZNF302Q9NR11 478 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 PDLIM7Q9NR12 457 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 GPRC5DQ9NZD1 345 aa7.74□□□□□ -1.17
SMAD1-202ENST00000394092 NOCTQ9UK39 431 aaKnown RBP7.74□□□□□ -1.17
SMAD1-202ENST00000394092 ESYT3A0FGR9 886 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 BHMG1C9JSJ3 638 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 EXTL3O43909 919 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SHOX2O60902 331 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 RGS20O76081 388 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 STBD1O95210 358 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PIGRP01833 764 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 OATP04181 439 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 MYBL1P10243 752 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CYP11B1P15538 503 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 COPB2P35606 906 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 NAMPTP43490 491 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 EMP3P54852 163 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ERVK-9P63128 1117 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 IRX5P78411 483 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 MRPS25P82663 173 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PRPF4BQ13523 1007 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 MTERF2Q49AM1 385 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 WDR44Q5JSH3 913 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 FAM160B1Q5W0V3 765 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 TRMT1LQ7Z2T5 733 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 EFCAB13Q8IY85 973 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ANKRD35Q8N283 1001 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 TSEN2Q8NCE0 465 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 DEPTORQ8TB45 409 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ZNF564Q8TBZ8 553 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 BSNDQ8WZ55 320 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CCDC127Q96BQ5 260 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ZNF653Q96CK0 615 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ZSWIM1Q9BR11 485 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 KIFC3Q9BVG8 833 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 AP1M1Q9BXS5 423 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 XPNPEP1Q9NQW7 623 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 TAS2R14Q9NYV8 317 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 AFG3L2Q9Y4W6 797 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 MAFBQ9Y5Q3 323 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CSADQ9Y600 493 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SBF1O95248 1867 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ADGRA3Q8IWK6 1321 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ZSCAN5CA6NGD5 496 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 HMGB1P1B2RPK0 211 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CYP26A1O43174 497 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SPOPO43791 374 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 GAS2O43903 313 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PHF2O75151 1096 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ATG7O95352 703 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SGPL1O95470 568 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CYP1A2P05177 515 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 DLATP10515 647 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CTNNA2P26232 953 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CHRNA3P32297 505 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ALDH5A1P51649 535 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 GUCY2FP51841 1108 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 HNRNPH2P55795 449 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 FMO1Q01740 532 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SP4Q02446 784 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 NEDD9Q14511 834 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PSMD6Q15008 389 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PTPROQ16827 1216 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SMYD5Q6GMV2 418 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SLC39A4Q6P5W5 647 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 RUFY4Q6ZNE9 571 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 NOP9Q86U38 636 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 DNAAF5Q86Y56 855 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PALB2Q86YC2 1186 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 RIOX2Q8IUF8 465 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 EXOC8Q8IYI6 725 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 TRPM4Q8TD43 1214 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 HELQQ8TDG4 1101 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms